RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
SP140-208ENST00000473711 PPTC7Q8NI37 304 aa11.87□□□□□ -0.51
SP140-208ENST00000473711 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
SP140-208ENST00000473711 FAM167AQ96KS9 214 aa11.87□□□□□ -0.51
SP140-208ENST00000473711 TIPINQ9BVW5 301 aa11.87□□□□□ -0.51
SP140-208ENST00000473711 PDLIM7Q9NR12 457 aa11.87□□□□□ -0.51
SP140-208ENST00000473711 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 PPFIA4O75335 1185 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 DGAT1O75907 488 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 KIF20AO95235 890 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 LGALS2P05162 132 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 PLS3P13797 630 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 HOXD10P28358 340 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 ZNF75DP51815 510 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 FANCCQ00597 558 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 TRIM32Q13049 653 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 IRF5Q13568 498 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 TARBP2Q15633 366 aaKnown RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 ZC2HC1CQ53FD0 456 aaPredicted RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 CENPPQ6IPU0 288 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 TTI2Q6NXR4 508 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 SARM1Q6SZW1 724 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 EPM2AIP1Q7L775 607 aaPredicted RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 ZNF720Q7Z2F6 126 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 FAM178BQ8IXR5 827 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 TRPV1Q8NER1 839 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 BBXQ8WY36 941 aaPredicted RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 TRIB2Q92519 343 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 LENG1Q96BZ8 264 aaPredicted RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 DRC1Q96MC2 740 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 SRRTQ9BXP5 876 aaKnown RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 ATP6V0A4Q9HBG4 840 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 OLFML3Q9NRN5 406 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 SEL1LQ9UBV2 794 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
SP140-208ENST00000473711 ZSWIM8A7E2V4 1837 aa11.86□□□□□ -0.51
SP140-208ENST00000473711 HBP1O60381 514 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 FKTNO75072 461 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 SERPINC1P01008 464 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 MMP3P08254 477 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 ZNF286BP0CG31 522 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 ZNF18P17022 549 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 CNGA1P29973 690 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 HOXD13P35453 343 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 SLC26A2P50443 739 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 PEX3P56589 373 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 DSG2Q14126 1118 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 EMC2Q15006 297 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 KSR1Q8IVT5 923 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 MCPH1Q8NEM0 835 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 KIFAP3Q92845 792 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 TMEM143Q96AN5 459 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 FIZ1Q96SL8 496 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 CEP89Q96ST8 783 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 TSG101Q99816 390 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 C16orf70Q9BSU1 422 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 AP5M1Q9H0R1 490 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 POLR3FQ9H1D9 316 aaPredicted RBP11.85□□□□□ -0.51
SP140-208ENST00000473711 RNPEPQ9H4A4 650 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 ERAP1Q9NZ08 941 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 IFNKQ9P0W0 207 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 LARSQ9P2J5 1176 aaKnown RBP11.85□□□□□ -0.51
SP140-208ENST00000473711 MGAMO43451 1857 aa11.85□□□□□ -0.51
SP140-208ENST00000473711 CCDC169A6NNP5 214 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 SLC16A4O15374 487 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 MAFO75444 373 aaPredicted RBP11.84□□□□□ -0.51
SP140-208ENST00000473711 CYBAP13498 195 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 AKR1A1P14550 325 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 ELNP15502 786 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 RFC5P40937 340 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 DGKDQ16760 1214 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
SP140-208ENST00000473711 CDKAL1Q5VV42 579 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 STXBP4Q6ZWJ1 553 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 TLK2Q86UE8 772 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 NOC3LQ8WTT2 800 aaKnown RBP11.84□□□□□ -0.51
SP140-208ENST00000473711 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
SP140-208ENST00000473711 TRAPPC12Q8WVT3 735 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 BSNDQ8WZ55 320 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 EEF2KMTQ96G04 330 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 NAP1L5Q96NT1 182 aaPredicted RBP11.84□□□□□ -0.51
SP140-208ENST00000473711 PPP1R9BQ96SB3 815 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 KCTD10Q9H3F6 313 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 DHX33Q9H6R0 707 aaKnown RBP11.84□□□□□ -0.51
SP140-208ENST00000473711 NRBP1Q9UHY1 535 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 Q9Y3F1 56 aa11.84□□□□□ -0.51
SP140-208ENST00000473711 A6NJR5 290 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 ZBTB42B2RXF5 422 aa11.83□□□□□ -0.52
SP140-208ENST00000473711 H3BRB1 525 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms