RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TBCAO75347 108 aaKnown RBP22.95■■□□□ 1.26
COL18A1-207ENST00000473212 ABCB4P21439 1286 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 BIRC3Q13489 604 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 GLT8D2Q9H1C3 349 aa22.95■■□□□ 1.26
COL18A1-207ENST00000473212 WRAP73Q9P2S5 460 aaPredicted RBP22.95■■□□□ 1.26
COL18A1-207ENST00000473212 CNOT8Q9UFF9 292 aaKnown RBP22.95■■□□□ 1.26
COL18A1-207ENST00000473212 NOVA2Q9UNW9 492 aaKnown RBP22.95■■□□□ 1.26
COL18A1-207ENST00000473212 GMNCA6NCL1 334 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 SRRM3A6NNA2 597 aaPredicted RBP22.94■■□□□ 1.26
COL18A1-207ENST00000473212 GH2P01242 217 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 ZNF76P36508 570 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 GALCP54803 685 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 KIAA1755Q5JYT7 1200 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 SYDE2Q5VT97 1194 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 TMC3Q7Z5M5 1100 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 CCDC26Q8TAB7 109 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 BORCS6Q96GS4 357 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 SLITRK6Q9H5Y7 841 aa22.94■■□□□ 1.26
COL18A1-207ENST00000473212 METTL14Q9HCE5 456 aaKnown RBP22.94■■□□□ 1.26
COL18A1-207ENST00000473212 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.94■■□□□ 1.26
COL18A1-207ENST00000473212 A0A0A6YYK5 440 aaPredicted RBP22.93■■□□□ 1.26
COL18A1-207ENST00000473212 MTMR3Q13615 1198 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 CBWD6Q4V339 395 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 CBWD3Q5JTY5 395 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 CBWD5Q5RIA9 395 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 SWT1Q5T5J6 900 aaKnown RBP22.93■■□□□ 1.26
COL18A1-207ENST00000473212 SYCE1Q8N0S2 351 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 MYCT1Q8N699 235 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 BANK1Q8NDB2 785 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 HES6Q96HZ4 224 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 DYDC2Q96IM9 177 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 CABS1Q96KC9 395 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 TRIM31Q9BZY9 425 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 TAS2R14Q9NYV8 317 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 PI4KBQ9UBF8 816 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 DCDC2CA8MYV0 355 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 RPL13P26373 211 aaKnown RBP22.93■■□□□ 1.26
COL18A1-207ENST00000473212 ANXA13P27216 316 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 USP8P40818 1118 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 ECE1P42892 770 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 DHX9Q08211 1270 aaKnown RBP22.93■■□□□ 1.26
COL18A1-207ENST00000473212 MOXD1Q6UVY6 613 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 C10orf71Q711Q0 1435 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 SCN9AQ15858 1988 aa22.93■■□□□ 1.26
COL18A1-207ENST00000473212 BACH1O14867 736 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 FGGP02679 453 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 CYP2J2P51589 502 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 PPP2R2AP63151 447 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 PLS1Q14651 629 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 C6orf89Q6UWU4 347 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 RDH13Q8NBN7 331 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 ZDHHC15Q96MV8 337 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 TRIM51Q9BSJ1 452 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 AMFRQ9UKV5 643 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 IGLV3-22A0A075B6J6 115 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 SLC16A3O15427 465 aaKnown RBP22.92■■□□□ 1.26
COL18A1-207ENST00000473212 TRAPPC3O43617 180 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 QPCTQ16769 361 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 ABCB5Q2M3G0 1257 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 TDRD3Q9H7E2 651 aaKnown RBP22.92■■□□□ 1.26
COL18A1-207ENST00000473212 DDX20Q9UHI6 824 aaKnown RBP22.92■■□□□ 1.26
COL18A1-207ENST00000473212 GGA2Q9UJY4 613 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 PPP1R9AQ9ULJ8 1098 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 UTP11Q9Y3A2 253 aaKnown RBP22.92■■□□□ 1.26
COL18A1-207ENST00000473212 NRXN2Q9P2S2 1712 aa22.92■■□□□ 1.26
COL18A1-207ENST00000473212 BUB1BO60566 1050 aaPredicted RBP22.91■■□□□ 1.26
COL18A1-207ENST00000473212 SLITRK3O94933 977 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 TRIM37O94972 964 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 CFBP00751 764 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 FERP16591 822 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 MAGOHP61326 146 aaKnown RBP22.91■■□□□ 1.26
COL18A1-207ENST00000473212 ACTN3Q08043 901 aaPredicted RBP22.91■■□□□ 1.26
COL18A1-207ENST00000473212 BMT2Q1RMZ1 405 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 AGBL2Q5U5Z8 902 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 FAM186BQ8IYM0 893 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 MAGOHBQ96A72 148 aaKnown RBP22.91■■□□□ 1.26
COL18A1-207ENST00000473212 VCPKMTQ9H867 229 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 INTUQ9ULD6 942 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 EYA4O95677 639 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 STAT1P42224 750 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 KRT71Q3SY84 523 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 DCAF12L1Q5VU92 463 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 TATDN1Q6P1N9 297 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 ARHGEF26Q96DR7 871 aa22.91■■□□□ 1.26
COL18A1-207ENST00000473212 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.91■■□□□ 1.265e-12■■■■■ 96.1
COL18A1-207ENST00000473212 CHORDC1Q9UHD1 332 aaPredicted RBP22.91■■□□□ 1.26
COL18A1-207ENST00000473212 TBX3O15119 743 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 NPEPPSP55786 919 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 PRPF4BQ13523 1007 aaKnown RBP22.9■■□□□ 1.26
COL18A1-207ENST00000473212 AADACL2Q6P093 401 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 CCDC13Q8IYE1 715 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 SLC35G2Q8TBE7 412 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 SEC14L1Q92503 715 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 FAM20AQ96MK3 541 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 GPR88Q9GZN0 384 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 ATP8B3O60423 1300 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 TISP43B9A030 160 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 FAM13AO94988 1023 aa22.9■■□□□ 1.26
COL18A1-207ENST00000473212 DRAP1Q14919 205 aaPredicted RBP22.9■■□□□ 1.26
COL18A1-207ENST00000473212 ARHGAP44Q17R89 818 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms