RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	RASSF10	A6NK89	507 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	IKBKB	O14920	756 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	CTDNEP1	O95476	244 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	YEATS4	O95619	227 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	PF4	P02776	101 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	CYP21A2	P08686	494 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	H2AFX	P16104	143 aa	Predicted RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	GBP1	P32455	592 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	FAM160A1	Q05DH4	1040 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	TEF	Q10587	303 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	KCTD2	Q14681	263 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	STX1A	Q16623	288 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	DEFB115	Q30KQ5	88 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	SNAP47	Q5SQN1	464 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	NOL8	Q76FK4	1167 aa	Known RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	AACS	Q86V21	672 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	DHX40	Q8IX18	779 aa	Known RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	CCAR2	Q8N163	923 aa	Known RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	NSUN7	Q8NE18	718 aa	Known RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	CCDC112	Q8NEF3	446 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF397	Q8NF99	534 aa	Predicted RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	KIF18A	Q8NI77	898 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	BRF1	Q92994	677 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ERO1A	Q96HE7	468 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	SUCLG2	Q96I99	432 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF396	Q96N95	335 aa	Predicted RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ASPN	Q9BXN1	380 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	UBXN6	Q9BZV1	441 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	TRIM5	Q9C035	493 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	TMX1	Q9H3N1	280 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	BICC1	Q9H694	974 aa	Known RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	PRDM11	Q9NQV5	511 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	KCNQ5	Q9NR82	932 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ANO10	Q9NW15	660 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	REV1	Q9UBZ9	1251 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	CLIP2	Q9UDT6	1046 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	KLHL3	Q9UH77	587 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	NRBP1	Q9UHY1	535 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF609	O15014	1411 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	NEDD4	P46934	1319 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	MAP3K15	Q6ZN16	1313 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	ANKRD36C	Q5JPF3	1778 aa		4.17	□□□□□ -1.74
CSMD2-208	ENST00000471438	GOLGA6L4	A6NEF3	574 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ABLIM1	O14639	778 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	FFAR3	O14843	346 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	CA12	O43570	354 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	HTR3B	O95264	441 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	SLU7	O95391	586 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ITGB3	P05106	788 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	EIF2S2	P20042	333 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ACVRL1	P37023	503 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	YBX1	P67809	324 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	CBX1	P83916	185 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	SCRN1	Q12765	414 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	LRMP	Q12912	555 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	OS9	Q13438	667 aa	Predicted RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	MRPL58	Q14197	206 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	TERF2	Q15554	542 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	PTPN14	Q15678	1187 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	PROSER3	Q2NL68	480 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	TNNI3K	Q59H18	835 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	NT5DC1	Q5TFE4	455 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438		Q6ZUG5	572 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ERMP1	Q7Z2K6	904 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	IGDCC3	Q8IVU1	814 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	CCAR1	Q8IX12	1150 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	MSL3	Q8N5Y2	521 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	KBTBD3	Q8NAB2	608 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ENOX1	Q8TC92	643 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	KREMEN1	Q96MU8	473 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	P2RX7	Q99572	595 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	NAT10	Q9H0A0	1025 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	CRTAC1	Q9NQ79	661 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	TFCP2L1	Q9NZI6	479 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	TUBE1	Q9UJT0	475 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	ABT1	Q9ULW3	272 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	PA2G4	Q9UQ80	394 aa	Known RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	TAF6L	Q9Y6J9	622 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	FPGT-TNNI3K	V9GXZ4	949 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	BCOR	Q6W2J9	1755 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	DLEC1	Q9Y238	1755 aa		4.16	□□□□□ -1.74
CSMD2-208	ENST00000471438	CARMIL3	Q8ND23	1372 aa		4.15	□□□□□ -1.74
CSMD2-208	ENST00000471438	MYH2	Q9UKX2	1941 aa		4.15	□□□□□ -1.74
CSMD2-208	ENST00000471438	MYH13	Q9UKX3	1938 aa		4.15	□□□□□ -1.74
CSMD2-208	ENST00000471438	KDM6A	O15550	1401 aa	Predicted RBP	4.15	□□□□□ -1.74
CSMD2-208	ENST00000471438	SSU72P8	A0A1W2PR75	194 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC69	A6NI79	296 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	MINDY4B	A8MYZ0	360 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CHURC1-FNTB	B4DL54	471 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	GOLGA6L19	H0YKK7	550 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCP110	O43303	1012 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	JAK2	O60674	1132 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	DNAJA2	O60884	412 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	LRRN2	O75325	713 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CIAO1	O76071	339 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms