RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TMOD1P28289 359 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 HYAL1Q12794 435 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 PPP2R5CQ13362 524 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 XKR3Q5GH77 459 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 EP400NLQ6ZTU2 488 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 SLC24A5Q71RS6 500 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 KLHL23Q8NBE8 558 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 KHSRPQ92945 711 aaKnown RBP eCLIP17.26■□□□□ 0.35
COL1A1-203ENST00000471344 SCLT1Q96NL6 688 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 NIFKQ9BYG3 293 aaKnown RBP17.26■□□□□ 0.35
COL1A1-203ENST00000471344 CD320Q9NPF0 282 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 RNF19AQ9NV58 838 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 ARID2Q68CP9 1835 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 DARSP14868 501 aaKnown RBP17.25■□□□□ 0.35
COL1A1-203ENST00000471344 IL9P15248 144 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 EIF4BP23588 611 aaKnown RBP17.25■□□□□ 0.35
COL1A1-203ENST00000471344 IRS1P35568 1242 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 KRT2P35908 639 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 NPEPPSP55786 919 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 COL19A1Q14993 1142 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 LEXMQ3ZCV2 418 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 KSR1Q8IVT5 923 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 NLRP7Q8WX94 980 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 PLVAPQ9BX97 442 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 C1orf112Q9NSG2 853 aa17.25■□□□□ 0.35
COL1A1-203ENST00000471344 BMP2KQ9NSY1 1161 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-203ENST00000471344 BTBD18B2RXH4 712 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 LINC01565O15544 149 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 GCFC2P16383 781 aaKnown RBP17.24■□□□□ 0.35
COL1A1-203ENST00000471344 LTBRP36941 435 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 PSMC5P62195 406 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 FAM189BP81408 668 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-203ENST00000471344 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 NCAPH2Q6IBW4 605 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 ADGRD2Q7Z7M1 963 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 NEK9Q8TD19 979 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 WASF1Q92558 559 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 P2RX5Q93086 422 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 PABPC5Q96DU9 382 aaKnown RBP17.24■□□□□ 0.35
COL1A1-203ENST00000471344 FAM20AQ96MK3 541 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 LMAN2LQ9H0V9 348 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 TMEM161AQ9NX61 479 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 CLDND1Q9NY35 253 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 RGL1Q9NZL6 768 aa17.24■□□□□ 0.35
COL1A1-203ENST00000471344 A0A087WZ62 844 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 ZBTB39O15060 712 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 PBX3P40426 434 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 GUCY1B3Q02153 619 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 CLUL1Q15846 466 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 ODR4Q5SWX8 454 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 PTCRAQ6ISU1 281 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-203ENST00000471344 RNF169Q8NCN4 708 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 POF1BQ8WVV4 589 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 DYDC2Q96IM9 177 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 FDXACB1Q9BRP7 624 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-203ENST00000471344 LXNQ9BS40 222 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 IGFLR1Q9H665 355 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 CWH43Q9H720 699 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 ATP6V0A4Q9HBG4 840 aa17.23■□□□□ 0.35
COL1A1-203ENST00000471344 TYW1Q9NV66 732 aaKnown RBP17.23■□□□□ 0.35
COL1A1-203ENST00000471344 SUCLA2Q9P2R7 463 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-203ENST00000471344 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
COL1A1-203ENST00000471344 TBX10O75333 385 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 MAFO75444 373 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-203ENST00000471344 ATF7P17544 494 aaPredicted RBP17.22■□□□□ 0.35
COL1A1-203ENST00000471344 QARSP47897 775 aaKnown RBP17.22■□□□□ 0.35
COL1A1-203ENST00000471344 CYP4A11Q02928 519 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 CLLU1OSQ5K130 101 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 SPOUT1Q5T280 376 aaKnown RBP17.22■□□□□ 0.35
COL1A1-203ENST00000471344 LRRC55Q6ZSA7 311 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 ECHDC2Q86YB7 292 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 RHPN2Q8IUC4 686 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 CCDC83Q8IWF9 413 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 DIS3L2Q8IYB7 885 aaKnown RBP17.22■□□□□ 0.35
COL1A1-203ENST00000471344 CASD1Q96PB1 797 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 CYP26B1Q9NR63 512 aa17.22■□□□□ 0.35
COL1A1-203ENST00000471344 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
COL1A1-203ENST00000471344 TBX3O15119 743 aa17.21■□□□□ 0.35
COL1A1-203ENST00000471344 P4HBP07237 508 aaKnown RBP17.21■□□□□ 0.35
COL1A1-203ENST00000471344 CTTNQ14247 550 aaKnown RBP17.21■□□□□ 0.35
COL1A1-203ENST00000471344 COLGALT1Q8NBJ5 622 aa17.21■□□□□ 0.35
COL1A1-203ENST00000471344 NLRP4Q96MN2 994 aa17.21■□□□□ 0.35
COL1A1-203ENST00000471344 KIF2CQ99661 725 aa17.21■□□□□ 0.35
COL1A1-203ENST00000471344 ELAC1Q9H777 363 aaKnown RBP17.21■□□□□ 0.35
COL1A1-203ENST00000471344 RAPGEFL1Q9UHV5 662 aa17.21■□□□□ 0.35
COL1A1-203ENST00000471344 MARCH6O60337 910 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 ZSCAN20P17040 1043 aaPredicted RBP17.2■□□□□ 0.34
COL1A1-203ENST00000471344 EPHA7Q15375 998 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 ZNF598Q86UK7 904 aaKnown RBP17.2■□□□□ 0.34
COL1A1-203ENST00000471344 TMEM143Q96AN5 459 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 CEP170P1Q96L14 293 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 EPHX3Q9H6B9 360 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 BRMS1Q9HCU9 246 aa17.2■□□□□ 0.34
COL1A1-203ENST00000471344 MEIS3P2A8K0S8 358 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms