RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PCSK9Q8NBP7 692 aaKnown RBP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 PIGOQ8TEQ8 1089 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 SENP7Q9BQF6 1050 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 REEP2Q9BRK0 252 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 HTATIP2Q9BUP3 242 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 SPTLC3Q9NUV7 552 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 PYCARDQ9ULZ3 195 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 TELO2Q9Y4R8 837 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 SAMM50Q9Y512 469 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 ITIH6Q6UXX5 1313 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 DDX39AO00148 427 aaKnown RBP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 ATP9AO75110 1047 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 ZNF746Q6NUN9 644 aaPredicted RBP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 ARMCX5Q6P1M9 558 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 C1orf186Q6ZWK4 172 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 CYFIP1Q7L576 1253 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 TSEN34Q9BSV6 310 aaKnown RBP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 ZHX3Q9H4I2 956 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 STARD7Q9NQZ5 370 aa19.29■□□□□ 0.68
HSPG2-208ENST00000471322 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.29■□□□□ 0.68
HSPG2-208ENST00000471322 ARHGEF35A5YM69 484 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 MOXD2PA6NHM9 499 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 TGFB3P10600 412 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 PBX1P40424 430 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 CPT1AP50416 773 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 ARID5BQ14865 1188 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 HSDL1Q3SXM5 330 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 CELF3Q5SZQ8 465 aaKnown RBP19.28■□□□□ 0.68
HSPG2-208ENST00000471322 KCNV1Q6PIU1 500 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 SLC39A5Q6ZMH5 540 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 PPP4R3CPQ6ZMV5 832 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 PPFIBP1Q86W92 1011 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 CREBRFQ8IUR6 639 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 RUSC1Q9BVN2 902 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 MLXIPQ9HAP2 919 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 TAB2Q9NYJ8 693 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 SEL1LQ9UBV2 794 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 DBR1Q9UK59 544 aaKnown RBP19.28■□□□□ 0.68
HSPG2-208ENST00000471322 ODF2LQ9ULJ1 636 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 ATP11BQ9Y2G3 1177 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 NFASCO94856 1347 aa19.28■□□□□ 0.68
HSPG2-208ENST00000471322 TEX33O43247 280 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 EVI5O60447 810 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 DKC1O60832 514 aaKnown RBP eCLIP19.27■□□□□ 0.68
HSPG2-208ENST00000471322 TPM1P09493 284 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 GUCY2CP25092 1073 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 KCNJ6P48051 423 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 CCZ1BP86790 482 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.68
HSPG2-208ENST00000471322 FKBP3Q00688 224 aaKnown RBP19.27■□□□□ 0.68
HSPG2-208ENST00000471322 SMAP1Q8IYB5 467 aaPredicted RBP19.27■□□□□ 0.68
HSPG2-208ENST00000471322 C7orf61Q8IZ16 206 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 BANK1Q8NDB2 785 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 GLT1D1Q96MS3 346 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 VPS16Q9H269 839 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 OLFML3Q9NRN5 406 aa19.27■□□□□ 0.68
HSPG2-208ENST00000471322 A6NJR5 290 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 LGALS16A8MUM7 142 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 ZEB2O60315 1214 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 FAM13AO94988 1023 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 MMP3P08254 477 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 ICAM3P32942 547 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 PSMC5P62195 406 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 NKX3-2P78367 333 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 RAD51AP2Q09MP3 1159 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 LAMC2Q13753 1193 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 TRIM14Q14142 442 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 TRIM60Q495X7 471 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 C4orf19Q8IY42 314 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 CNOT6LQ96LI5 555 aaKnown RBP19.26■□□□□ 0.67
HSPG2-208ENST00000471322 TUBGCP2Q9BSJ2 902 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 DOCK5Q9H7D0 1870 aa19.26■□□□□ 0.67
HSPG2-208ENST00000471322 A0A1W2PQC6 194 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 GNA14O95837 355 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 DNM2P50570 870 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 PURAQ00577 322 aaKnown RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 ZCWPW2Q504Y3 356 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 BRDTQ58F21 947 aaPredicted RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 STXBP4Q6ZWJ1 553 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 SCFD1Q8WVM8 642 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 CEP63Q96MT8 703 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 TIPINQ9BVW5 301 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 PARVGQ9HBI0 331 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 TBC1D7Q9P0N9 293 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 WRAP73Q9P2S5 460 aaPredicted RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 PCDHA10Q9Y5I2 948 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 ALPK3Q96L96 1907 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 PQBP1O60828 265 aaKnown RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 ZNF286BP0CG31 522 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 KCNA2P16389 499 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 MTIF2P46199 727 aaKnown RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 RTP1P59025 263 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 UBXN1Q04323 297 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 BMT2Q1RMZ1 405 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 EDRF1Q3B7T1 1238 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 EPM2AIP1Q7L775 607 aaPredicted RBP19.25■□□□□ 0.67
HSPG2-208ENST00000471322 SFR1Q86XK3 245 aa19.25■□□□□ 0.67
HSPG2-208ENST00000471322 PPTC7Q8NI37 304 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms