RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PBXIP1Q96AQ6 731 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 CWH43Q9H720 699 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF302Q9NR11 478 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 GINS2Q9Y248 185 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 WDFY4Q6ZS81 3184 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 STK36Q9NRP7 1315 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 ESYT2A0FGR8 921 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 DDX39AO00148 427 aaKnown RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 IPO5O00410 1097 aaKnown RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 PER2O15055 1255 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 GPR32O75388 356 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 CTDNEP1O95476 244 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 CYP3A4P08684 503 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 SRGAP2BP0DMP2 458 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 LAG3P18627 525 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 ATP4AP20648 1035 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF76P36508 570 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 ERVFC1P60507 584 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 RBM10P98175 930 aaKnown RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 PLCB3Q01970 1234 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 SIGLEC14Q08ET2 396 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 DSC3Q14574 896 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 KIZQ2M2Z5 673 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 SPOUT1Q5T280 376 aaKnown RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF746Q6NUN9 644 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 MIS18BP1Q6P0N0 1132 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 PDXDC2PQ6P474 469 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 PLA2G4DQ86XP0 818 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 SUGP1Q8IWZ8 645 aaKnown RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 SMAP1Q8IYB5 467 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 TRIM22Q8IYM9 498 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 THNSL1Q8IYQ7 743 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 FBXL6Q8N531 539 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 BBXQ8WY36 941 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 OSMRQ99650 979 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 RNF26Q9BY78 433 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM117Q9H0C3 514 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 ATP6V0A4Q9HBG4 840 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 TBC1D22BQ9NU19 505 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 TYW1Q9NV66 732 aaKnown RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM260Q9NX78 707 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 MAFBQ9Y5Q3 323 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-206ENST00000471037 TRIOO75962 3097 aa10.24□□□□□ -0.77
SF3A1-206ENST00000471037 KMT2EQ8IZD2 1858 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 HOXA2O43364 376 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 JAK2O60674 1132 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 FGFR1P11362 822 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 PDIA4P13667 645 aaKnown RBP10.23□□□□□ -0.77
SF3A1-206ENST00000471037 PDCP20941 246 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 GJB2P29033 226 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
SF3A1-206ENST00000471037 SSRP1Q08945 709 aaKnown RBP10.23□□□□□ -0.77
SF3A1-206ENST00000471037 TCF15Q12870 199 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 IER5LQ5T953 404 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 MCTP2Q6DN12 878 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 SWSAP1Q6NVH7 229 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF710Q8N1W2 664 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 LRRC43Q8N309 656 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 LINC01465Q8N7H1 131 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 FAM184AQ8NB25 1140 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 SPRYD3Q8NCJ5 442 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 MRPS27Q92552 414 aaKnown RBP10.23□□□□□ -0.77
SF3A1-206ENST00000471037 WASF1Q92558 559 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 ASIC4Q96FT7 647 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 RPGRIP1Q96KN7 1286 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 S1PR5Q9H228 398 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 NGRNQ9NPE2 291 aaKnown RBP10.23□□□□□ -0.77
SF3A1-206ENST00000471037 ORC3Q9UBD5 711 aaPredicted RBP10.23□□□□□ -0.77
SF3A1-206ENST00000471037 CEP131Q9UPN4 1083 aa10.23□□□□□ -0.77
SF3A1-206ENST00000471037 MAGEB2O15479 319 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
SF3A1-206ENST00000471037 DEXIO95424 95 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 VTNP04004 478 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 HOXB8P17481 243 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-206ENST00000471037 IBSPP21815 317 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PPM1AP35813 382 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PTPN21Q16825 1174 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PFKFB3Q16875 520 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-206ENST00000471037 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 ANKRD54Q6NXT1 300 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 SYCE2Q6PIF2 218 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 KCNT2Q6UVM3 1135 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 CKAP2LQ8IYA6 745 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 FAM167AQ96KS9 214 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 CASD1Q96PB1 797 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 TCF25Q9BQ70 676 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF577Q9BSK1 485 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 SLC26A6Q9BXS9 759 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 ZMYND12Q9H0C1 365 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 RNF19AQ9NV58 838 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PUF60Q9UHX1 559 aaKnown RBP10.22□□□□□ -0.77
SF3A1-206ENST00000471037 CIZ1Q9ULV3 898 aaPredicted RBP10.22□□□□□ -0.77
SF3A1-206ENST00000471037 PCDHA10Q9Y5I2 948 aa10.22□□□□□ -0.77
SF3A1-206ENST00000471037 HIDE1A8MVS5 230 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 PSAPP07602 524 aa10.21□□□□□ -0.77
SF3A1-206ENST00000471037 EIF4BP23588 611 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms