RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 BCAS3Q9H6U6 928 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 GGA1Q9UJY5 639 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 NCANO14594 1321 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 CYP3A7-CYP3A51PA0A087WV96 503 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 GOLGA6L10A0A0M3HER8 536 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 SPATA31C1P0DKV0 1188 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 LMNB1P20700 586 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 IBSPP21815 317 aaPredicted RBP14.28□□□□□ -0.12
SFXN3-205ENST00000470252 CYP3A7P24462 503 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 SOX5P35711 763 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 PREPLQ4J6C6 727 aaPredicted RBP14.28□□□□□ -0.12
SFXN3-205ENST00000470252 LACTB2Q53H82 288 aaPredicted RBP14.28□□□□□ -0.12
SFXN3-205ENST00000470252 ERMARDQ5T6L9 678 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 SLC30A5Q8TAD4 765 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 CTNNBL1Q8WYA6 563 aaPredicted RBP14.28□□□□□ -0.12
SFXN3-205ENST00000470252 CCT6BQ92526 530 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 RPGRQ92834 1020 aaKnown RBP14.28□□□□□ -0.12
SFXN3-205ENST00000470252 SCLT1Q96NL6 688 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 SELENOSQ9BQE4 189 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 FAM129AQ9BZQ8 928 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 ERVK-5Q9HDB9 667 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 SERPINB13Q9UIV8 391 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 DAAM1Q9Y4D1 1078 aa14.28□□□□□ -0.12
SFXN3-205ENST00000470252 F8W031 263 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-205ENST00000470252 TBCAO75347 108 aaKnown RBP14.27□□□□□ -0.13
SFXN3-205ENST00000470252 TMEM253P0C7T8 217 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 ATP2B4P23634 1241 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 RPA1P27694 616 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 CYP4A11Q02928 519 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 ZNF211Q13398 564 aaPredicted RBP14.27□□□□□ -0.13
SFXN3-205ENST00000470252 SPDYCQ5MJ68 293 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 CEP57Q86XR8 500 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 CNBD1Q8NA66 436 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 ETNPPLQ8TBG4 499 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 GLG1Q92896 1179 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 ERP44Q9BS26 406 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 GLT8D2Q9H1C3 349 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 DDX4Q9NQI0 724 aaKnown RBP14.27□□□□□ -0.13
SFXN3-205ENST00000470252 MYO3BQ8WXR4 1341 aa14.27□□□□□ -0.13
SFXN3-205ENST00000470252 TLDC2A0PJX2 215 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 GTPBP10A4D1E9 387 aaKnown RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 SMIM23A6NLE4 172 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 CHN1P15882 459 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 PMS2P54278 862 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 PLTPP55058 493 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 ARHGAP4P98171 946 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 NEDD9Q14511 834 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 PLS1Q14651 629 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 FAM98CQ17RN3 349 aaKnown RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 BMT2Q1RMZ1 405 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 DUPD1Q68J44 220 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 CCDC50Q8IVM0 306 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 OLIG1Q8TAK6 271 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 TBC1D22AQ8WUA7 517 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 P3H4Q92791 437 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 CENPTQ96BT3 561 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 MBOAT7Q96N66 472 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 NAP1L3Q99457 506 aaPredicted RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 RUSC1Q9BVN2 902 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 BHMT2Q9H2M3 363 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 KDM4CQ9H3R0 1056 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 ZDHHC18Q9NUE0 388 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 SEPT11Q9NVA2 429 aaKnown RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 SFI1A8K8P3 1242 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 MMEP08473 750 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 PPATQ06203 517 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 SF3A3Q12874 501 aaKnown RBP eCLIP14.26□□□□□ -0.131e-7■■■□□ 16.1
SFXN3-205ENST00000470252 DRAP1Q14919 205 aaPredicted RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 DENND2CQ68D51 928 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 BARGINQ6ZT62 677 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 FAM228AQ86W67 206 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 CCDC197Q8NCU1 140 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 IKZF4Q9H2S9 585 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 EPB41L4BQ9H329 900 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 MCM8Q9UJA3 840 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 DNAJC12Q9UKB3 198 aa14.26□□□□□ -0.13
SFXN3-205ENST00000470252 TPX2Q9ULW0 747 aaKnown RBP14.26□□□□□ -0.13
SFXN3-205ENST00000470252 OPLAHO14841 1288 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 KRT13P13646 458 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 SHMT1P34896 483 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 XRCC4Q13426 336 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 PPP2R5EQ16537 467 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 RPAINQ86UA6 219 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 FAM186BQ8IYM0 893 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 NEK9Q8TD19 979 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 ARHGEF26Q96DR7 871 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 CARD9Q9H257 536 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 PABPC3Q9H361 631 aaKnown RBP14.25□□□□□ -0.13
SFXN3-205ENST00000470252 SNX24Q9Y343 169 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 NUDT17P0C025 328 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 GHRP10912 638 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 KLRC3Q07444 240 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 WLSQ5T9L3 541 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 MOXD1Q6UVY6 613 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 JAMLQ86YT9 394 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 TACO1Q9BSH4 297 aaKnown RBP14.25□□□□□ -0.13
SFXN3-205ENST00000470252 STK33Q9BYT3 514 aa14.25□□□□□ -0.13
SFXN3-205ENST00000470252 FAM187AA6NFU0 413 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms