RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 KRIT1O00522 736 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 DDX3YO15523 660 aaKnown RBP14.85□□□□□ -0.03
BRCA1-209ENST00000470026 PPP1R12BO60237 982 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-209ENST00000470026 PPP1R37O75864 691 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 PDE6BP35913 854 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 ZNF76P36508 570 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 MDH1P40925 334 aaKnown RBP14.85□□□□□ -0.03
BRCA1-209ENST00000470026 ATP1A2P50993 1020 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 MYBPC2Q14324 1141 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 RRP1BQ14684 758 aaKnown RBP14.85□□□□□ -0.03
BRCA1-209ENST00000470026 PTGISQ16647 500 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 TTC31Q49AM3 519 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-209ENST00000470026 B4GALNT4Q76KP1 1039 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 MYCT1Q8N699 235 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 PIGOQ8TEQ8 1089 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 DYDC2Q96IM9 177 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 DDX47Q9H0S4 455 aaKnown RBP14.85□□□□□ -0.03
BRCA1-209ENST00000470026 ODF2LQ9ULJ1 636 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 LOXHD1Q8IVV2 1947 aa14.85□□□□□ -0.03
BRCA1-209ENST00000470026 GH2P01242 217 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 ITGA4P13612 1032 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 HMGB2P26583 209 aaKnown RBP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 PRELPP51888 382 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 HLTFQ14527 1009 aaKnown RBP eCLIP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 DRAP1Q14919 205 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 ZC2HC1CQ53FD0 456 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 SPDYCQ5MJ68 293 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 CEP85LQ5SZL2 805 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 MAATS1Q7Z4T9 603 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 DAAM2Q86T65 1068 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 TMEM174Q8WUU8 243 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 IKZF4Q9H2S9 585 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 POLD4Q9HCU8 107 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 DNAJC12Q9UKB3 198 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 AMFRQ9UKV5 643 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 TMCO5BA8MYB1 307 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 NDUFAB1O14561 156 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 BUB1BO60566 1050 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 HADHBP55084 474 aaKnown RBP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 BIRC3Q13489 604 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 MTMR3Q13615 1198 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 TCEAL1Q15170 157 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 CBWD6Q4V339 395 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 CBWD3Q5JTY5 395 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 CBWD5Q5RIA9 395 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 RBM26Q5T8P6 1007 aaKnown RBP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 LRCH2Q5VUJ6 765 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 DDX42Q86XP3 938 aaKnown RBP eCLIP14.84□□□□□ -0.03
BRCA1-209ENST00000470026 CCDC26Q8TAB7 109 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 GGA2Q9UJY4 613 aa14.84□□□□□ -0.03
BRCA1-209ENST00000470026 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 RFX1P22670 979 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 GUCY2CP25092 1073 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 GUCY1A3Q02108 690 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 IKQ13123 557 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-209ENST00000470026 PLS1Q14651 629 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 COG2Q14746 738 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 KIF22Q14807 665 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 AGBL2Q5U5Z8 902 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 STXBP4Q6ZWJ1 553 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 YTHDF3Q7Z739 585 aaKnown RBP14.83□□□□□ -0.04
BRCA1-209ENST00000470026 GLYCTKQ8IVS8 523 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 ARFGAP2Q8N6H7 521 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 LMO3Q8TAP4 145 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 SLC35G2Q8TBE7 412 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 NACC1Q96RE7 527 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 TXLNGYQ9BZA5 131 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 INTS2Q9H0H0 1204 aaKnown RBP14.83□□□□□ -0.04
BRCA1-209ENST00000470026 CARD9Q9H257 536 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 OSGEPQ9NPF4 335 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 FAM114A2Q9NRY5 505 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 APEX2Q9UBZ4 518 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 AMACRQ9UHK6 382 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 SLC12A6Q9UHW9 1150 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 IGSF9BQ9UPX0 1349 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 CCDC172P0C7W6 258 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 PPP2R5EQ16537 467 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 NAA35Q5VZE5 725 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 RUFY4Q6ZNE9 571 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 HS2ST1Q7LGA3 356 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 TMC3Q7Z5M5 1100 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 TPH2Q8IWU9 490 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 TMX4Q9H1E5 349 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-209ENST00000470026 WRAP73Q9P2S5 460 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-209ENST00000470026 PPP1R9AQ9ULJ8 1098 aa14.83□□□□□ -0.04
BRCA1-209ENST00000470026 AFF2P51816 1311 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 GCOM1H8Y6P7 765 aaPredicted RBP14.82□□□□□ -0.04
BRCA1-209ENST00000470026 MYO1FO00160 1098 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 ZBTB39O15060 712 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 DAPK3O43293 454 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 ECE2O60344 883 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 MYZAPP0CAP1 466 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 FLT3P36888 993 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 STAT2P52630 851 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 PTENP60484 403 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 MAPK7Q13164 816 aa14.82□□□□□ -0.04
BRCA1-209ENST00000470026 SKIDA1Q1XH10 827 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms