RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 KAT5Q92993 513 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 CTDP1Q9Y5B0 961 aaPredicted RBP19.43■□□□□ 0.7
MCF2L-221ENST00000469415 FLOT1O75955 427 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 FMO5P49326 533 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 MARSP56192 900 aaKnown RBP19.43■□□□□ 0.7
MCF2L-221ENST00000469415 MUM1L1Q5H9M0 696 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 NACC1Q96RE7 527 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 MED4Q9NPJ6 270 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 ZMYM2Q9UBW7 1377 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 OR2W6PQ8NHA6 318 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 MRIQ9BWK5 157 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 CELF4Q9BZC1 486 aaKnown RBP19.43■□□□□ 0.7
MCF2L-221ENST00000469415 DPH5Q9H2P9 285 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 ARFGEF1Q9Y6D6 1849 aa19.43■□□□□ 0.7
MCF2L-221ENST00000469415 ZC3H4Q9UPT8 1303 aaKnown RBP19.42■□□□□ 0.7
MCF2L-221ENST00000469415 SLC16A4O15374 487 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 CAP2P40123 477 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 RASA3Q14644 834 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 PHLDB2Q86SQ0 1253 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 CASKIN2Q8WXE0 1202 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 CCDC169A6NNP5 214 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 RBAK-RBAKDNI3L0D1 243 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 DPY19L2P1Q6NXN4 242 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 AADACL2Q6P093 401 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 MAATS1Q7Z4T9 603 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 VPS36Q86VN1 386 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 METTL13Q8N6R0 699 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 LNX1Q8TBB1 728 aaPredicted RBP19.42■□□□□ 0.7
MCF2L-221ENST00000469415 SLC20A1Q8WUM9 679 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 TAAR1Q96RJ0 339 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 METTL14Q9HCE5 456 aaKnown RBP19.42■□□□□ 0.7
MCF2L-221ENST00000469415 UBE2TQ9NPD8 197 aaPredicted RBP19.42■□□□□ 0.7
MCF2L-221ENST00000469415 AMACRQ9UHK6 382 aa19.42■□□□□ 0.7
MCF2L-221ENST00000469415 ZEB2O60315 1214 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 KIF4AO95239 1232 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 PEX3P56589 373 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 DAW1Q8N136 415 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 FAM76AQ8TAV0 307 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 SYN2Q92777 582 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-221ENST00000469415 SAAL1Q96ER3 474 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 POP1Q99575 1024 aaKnown RBP19.41■□□□□ 0.7
MCF2L-221ENST00000469415 STK32BQ9NY57 414 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 LTBP1Q14766 1721 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 IGSF9BQ9UPX0 1349 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 FOXN3O00409 490 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-221ENST00000469415 ATMINO43313 823 aaPredicted RBP19.41■□□□□ 0.7
MCF2L-221ENST00000469415 SLC5A5Q92911 643 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 ZIM3Q96PE6 472 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 BCCIPQ9P287 314 aaKnown RBP eCLIP19.41■□□□□ 0.7
MCF2L-221ENST00000469415 WNT10BO00744 389 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 HSF2BPO75031 334 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 ATP9AO75110 1047 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 CYP3A4P08684 503 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 MMP14P50281 582 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 MYL7Q01449 175 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 FAM102BQ5T8I3 360 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 SAMD7Q7Z3H4 446 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 WNK4Q96J92 1243 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 NR2E1Q9Y466 385 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 TELO2Q9Y4R8 837 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 ZHX2Q9Y6X8 837 aa19.41■□□□□ 0.7
MCF2L-221ENST00000469415 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 EMSYQ7Z589 1322 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 COL11A2P13942 1736 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-221ENST00000469415 BRWD3Q6RI45 1802 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 KRIT1O00522 736 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 CXCL9Q07325 125 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 LRRC31Q6UY01 552 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 IFT20Q8IY31 132 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 ARHGEF26Q96DR7 871 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 INPP4AQ96PE3 977 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-221ENST00000469415 FAM107BQ9H098 131 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 INTS2Q9H0H0 1204 aaKnown RBP19.4■□□□□ 0.7
MCF2L-221ENST00000469415 TMOD4Q9NZQ9 345 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 PCDHGC5Q9Y5F6 944 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 VIL1P09327 827 aaKnown RBP19.4■□□□□ 0.7
MCF2L-221ENST00000469415 PRLRP16471 622 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 ITGB3BPQ13352 177 aaPredicted RBP19.4■□□□□ 0.7
MCF2L-221ENST00000469415 UGCGQ16739 394 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 PHLDB3Q6NSJ2 640 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 FIZ1Q96SL8 496 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 GJA3Q9Y6H8 435 aa19.4■□□□□ 0.7
MCF2L-221ENST00000469415 PIK3CDO00329 1044 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 GAP43P17677 238 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 TNFAIP3P21580 790 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 EPHB4P54760 987 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 SF3A3Q12874 501 aaKnown RBP eCLIP19.39■□□□□ 0.698e-9■■■■■ 53.8
MCF2L-221ENST00000469415 CFAP58Q5T655 872 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 TPCN2Q8NHX9 752 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 MXRA8Q9BRK3 442 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 RANBP17Q9H2T7 1088 aaKnown RBP19.39■□□□□ 0.69
MCF2L-221ENST00000469415 TUFT1Q9NNX1 390 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 OLFML3Q9NRN5 406 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 BUB1BO60566 1050 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-221ENST00000469415 PEX10O60683 326 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 HPDP32754 393 aaPredicted RBP19.39■□□□□ 0.69
MCF2L-221ENST00000469415 NIM1KQ8IY84 436 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 USP38Q8NB14 1042 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 SLC35G2Q8TBE7 412 aa19.39■□□□□ 0.69
MCF2L-221ENST00000469415 IPO4Q8TEX9 1081 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms