RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 LRIG3Q6UXM1 1119 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 MICALCLQ6ZW33 695 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 SIAH1Q8IUQ4 282 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 KLC4Q9NSK0 619 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 TYW1Q9NV66 732 aaKnown RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 SUCLA2Q9P2R7 463 aaPredicted RBP13.12□□□□□ -0.31
VARS2-205ENST00000469358 ARFGEF1Q9Y6D6 1849 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 UTRNP46939 3433 aa13.12□□□□□ -0.31
VARS2-205ENST00000469358 TCRBV7S2A1N4TA0A589 114 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 ZNF76P36508 570 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 POU5F1Q01860 360 aaKnown RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 ZDHHC14Q8IZN3 488 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 FBXO25Q8TCJ0 367 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 FMO2Q99518 471 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 EPB41L4BQ9H329 900 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 MYO3BQ8WXR4 1341 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 SMCHD1A6NHR9 2005 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 ZMYM2Q9UBW7 1377 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 BTNL10A8MVZ5 291 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 IFNAR2P48551 515 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 IFI16Q16666 785 aaKnown RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 VPS36Q86VN1 386 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 KIAA0825Q8IV33 1275 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 SLF2Q8IX21 1173 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 GPR88Q9GZN0 384 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 PKD2L1Q9P0L9 805 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 SOX5P35711 763 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 DLG4P78352 724 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 DR1Q01658 176 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 APOBEC3HQ6NTF7 200 aaKnown RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 C15orf52Q6ZUT6 534 aaKnown RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 RASGEF1CQ8N431 466 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 ZSWIM2Q8NEG5 633 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 CCDC26Q8TAB7 109 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 RNF25Q96BH1 459 aaPredicted RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 HOOK2Q96ED9 719 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 CEP89Q96ST8 783 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 PCIF1Q9H4Z3 704 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 WRAP73Q9P2S5 460 aaPredicted RBP13.11□□□□□ -0.31
VARS2-205ENST00000469358 PTPN22Q9Y2R2 807 aa13.11□□□□□ -0.31
VARS2-205ENST00000469358 A6NNZ2 444 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 CTNND1O60716 968 aaKnown RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 FGFR4P22455 802 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 USP8P40818 1118 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
VARS2-205ENST00000469358 TUBB8Q3ZCM7 444 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 RUFY4Q6ZNE9 571 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 SLFN12Q8IYM2 578 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 ARFGAP2Q8N6H7 521 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 SLC30A5Q8TAD4 765 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 DYDC2Q96IM9 177 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 CALR3Q96L12 384 aaKnown RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 CCDC113Q9H0I3 377 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 VAV3Q9UKW4 847 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 FAM13AO94988 1023 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 E2F5Q15329 346 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 C10orf76Q5T2E6 689 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 TBC1D22AQ8WUA7 517 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 CTNNBL1Q8WYA6 563 aaPredicted RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 KAT5Q92993 513 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 ZKSCAN4Q969J2 545 aaPredicted RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 BORCS6Q96GS4 357 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 SCLT1Q96NL6 688 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 PSMD1Q99460 953 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 SEMA4AQ9H3S1 761 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 AZI2Q9H6S1 392 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 BHMG1C9JSJ3 638 aaPredicted RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 ANKRD63C9JTQ0 380 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 F5H6K3 240 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 CCDC188H7C350 402 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 CHN1P15882 459 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 KCNJ1P48048 391 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 FMO5P49326 533 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 KLRC3Q07444 240 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 PHLDB3Q6NSJ2 640 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 ERMNQ8TAM6 284 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 CRYGNQ8WXF5 182 aa13.1□□□□□ -0.31
VARS2-205ENST00000469358 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
VARS2-205ENST00000469358 NHSQ6T4R5 1651 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CYP3A7-CYP3A51PA0A087WV96 503 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CES2O00748 559 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 CYP3A7P24462 503 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 SLC29A2Q14542 456 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 ANKRD20A8PQ5CZ79 823 aa13.09□□□□□ -0.31
VARS2-205ENST00000469358 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
VARS2-205ENST00000469358 NCAPGQ9BPX3 1015 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms