RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SLFN11Q7Z7L1 901 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 IKZF4Q9H2S9 585 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 STXBP5LQ9Y2K9 1186 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 KIF13BQ9NQT8 1826 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 A0A0A6YYK5 440 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 TGFB1I1O43294 461 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 ERLIN2O94905 339 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 FERP16591 822 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 LRIG3Q6UXM1 1119 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 POLR3CQ9BUI4 534 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 EPN3Q9H201 632 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-211ENST00000468468 CCDC188H7C350 402 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 ENTPD3O75355 529 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 ITGA4P13612 1032 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 DPEP1P16444 411 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 CIITAP33076 1130 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 STAT1P42224 750 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 KCTD19Q17RG1 926 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 SYDE2Q5VT97 1194 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 RINT1Q6NUQ1 792 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 SYCE1Q8N0S2 351 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 LARGE2Q8N3Y3 721 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 PIGOQ8TEQ8 1089 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 LRRC45Q96CN5 670 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 NEUROG2Q9H2A3 272 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 INTUQ9ULD6 942 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 GTPBP10A4D1E9 387 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 PPP1R37O75864 691 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 FAM13AO94988 1023 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 KCNA3P22001 575 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 POLD1P28340 1107 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 MDH1P40925 334 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 GALCP54803 685 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 ITGB3BPQ13352 177 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 CTTNQ14247 550 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 RSBN1LQ6PCB5 846 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 NT5DC3Q86UY8 548 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 FAM186BQ8IYM0 893 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 OR2W6PQ8NHA6 318 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 AMACRQ9UHK6 382 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 ATRNL1Q5VV63 1379 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 COL4A5P29400 1685 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 ATP8B3O60423 1300 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 EVI5O60447 810 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 NDUFB10O96000 172 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 GAP43P17677 238 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 NMT1P30419 496 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 INPP5BP32019 993 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 HPDP32754 393 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 UAP1Q16222 522 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 PTGISQ16647 500 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 RASGEF1CQ8N431 466 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 MYCT1Q8N699 235 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 BORCS6Q96GS4 357 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 OLFML3Q9NRN5 406 aa17.17■□□□□ 0.34
TSPAN4-211ENST00000468468 A0A1W2PRG0 241 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 BHMG1C9JSJ3 638 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 MYZAPP0CAP1 466 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 PSMC2P35998 433 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 ZC2HC1CQ53FD0 456 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 SLC30A10Q6XR72 485 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 H0YGN5 161 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 CTNNA1P35221 906 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 NPEPPSP55786 919 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 SPICE1Q8N0Z3 855 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 AMFRQ9UKV5 643 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 NFS1Q9Y697 457 aa17.16■□□□□ 0.34
TSPAN4-211ENST00000468468 OPLAHO14841 1288 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 DAPK3O43293 454 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 SOX5P35711 763 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 SEC24CP53992 1094 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 NAA35Q5VZE5 725 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 GLYCTKQ8IVS8 523 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 TPH2Q8IWU9 490 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 GMCL1P1Q8NEA9 526 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 CCDC26Q8TAB7 109 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 HES6Q96HZ4 224 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 OSGEPQ9NPF4 335 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 ZMYM2Q9UBW7 1377 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 FLT3P36888 993 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 CDAN1Q8IWY9 1227 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 SLC30A5Q8TAD4 765 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 ZNF473Q8WTR7 871 aaKnown RBP17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 UBLCP1Q8WVY7 318 aaPredicted RBP17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 GMCL1Q96IK5 515 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 DNAJC12Q9UKB3 198 aa17.15■□□□□ 0.34
TSPAN4-211ENST00000468468 EIF3DO15371 548 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 TTI1O43156 1089 aa17.14■□□□□ 0.33
TSPAN4-211ENST00000468468 KIAA0754O94854 1291 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms