RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 GLIS3Q8NEA6 775 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 MYRIPQ8NFW9 859 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 SCFD2Q8WU76 684 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 ZFP91Q96JP5 570 aaPredicted RBP11.17□□□□□ -0.62
MSH5-213ENST00000468136 MS4A4AQ96JQ5 239 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 TSGA10Q9BZW7 698 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 AZI2Q9H6S1 392 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 MMRN2Q9H8L6 949 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 KIAA1586Q9HCI6 787 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 VTA1Q9NP79 307 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 PDLIM7Q9NR12 457 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 CYP26B1Q9NR63 512 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 AGPAT3Q9NRZ7 376 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 ADGRG1Q9Y653 693 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 EPN1Q9Y6I3 576 aaPredicted RBP11.17□□□□□ -0.62
MSH5-213ENST00000468136 IVNS1ABPQ9Y6Y0 642 aa11.17□□□□□ -0.62
MSH5-213ENST00000468136 SYNGAP1Q96PV0 1343 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 EIF3CLB5ME19 914 aaKnown RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 PDHXO00330 501 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 KIF5CO60282 957 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 LGR5O75473 907 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 FARP2O94887 1054 aaPredicted RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 STBD1O95210 358 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 CCDC172P0C7W6 258 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 UBA1P22314 1058 aaKnown RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 MAPK4P31152 587 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 GJA5P36382 358 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 INHBEP58166 350 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 TUBB4BP68371 445 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 PRKCEQ02156 737 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 BRDTQ58F21 947 aaPredicted RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 FAM102BQ5T8I3 360 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 SPRYD7Q5W111 196 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 MAP1SQ66K74 1059 aaPredicted RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 SEPT14Q6ZU15 432 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 MAP4K3Q8IVH8 894 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 REXO1L1PQ8IX06 675 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 TCP11Q8WWU5 503 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 SLC7A3Q8WY07 619 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 BORCS6Q96GS4 357 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 EIF3CQ99613 913 aaKnown RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 FGFBP2Q9BYJ0 223 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 HAUS4Q9H6D7 363 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 MLXIPQ9HAP2 919 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 KMT5AQ9NQR1 393 aa11.16□□□□□ -0.62
MSH5-213ENST00000468136 TRMT1Q9NXH9 659 aaKnown RBP11.16□□□□□ -0.62
MSH5-213ENST00000468136 EMSYQ7Z589 1322 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 MANSC4A6NHS7 340 aaPredicted RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 SFI1A8K8P3 1242 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 DYNC1I1O14576 645 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 ZBTB39O15060 712 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 NKRFO15226 690 aaKnown RBP eCLIP11.15□□□□□ -0.62
MSH5-213ENST00000468136 ZNF862O60290 1169 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 EXOC3O60645 756 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 AKAP3O75969 853 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 GFPT2O94808 682 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 NDUFA10O95299 355 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 CELF2O95319 508 aaKnown RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 GARTP22102 1010 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 NAMPTP43490 491 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 STAT5BP51692 787 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 POLGP54098 1239 aaPredicted RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 PEX3P56589 373 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 LAMC2Q13753 1193 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 SPA17Q15506 151 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 UGCGQ16739 394 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 EXOC3L4Q17RC7 722 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 FAM110CQ1W6H9 321 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 SLC9C1Q4G0N8 1177 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 ARHGAP29Q52LW3 1261 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 CELF3Q5SZQ8 465 aaKnown RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 C10orf76Q5T2E6 689 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 PDXDC1Q6P996 788 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 DLK2Q6UY11 383 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 CCDC60Q8IWA6 550 aaPredicted RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 XXYLT1Q8NBI6 393 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 BBXQ8WY36 941 aaPredicted RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 FAM81BQ96LP2 452 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 CCDC42Q96M95 316 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 DHX33Q9H6R0 707 aaKnown RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 TXNRD2Q9NNW7 524 aa11.15□□□□□ -0.62
MSH5-213ENST00000468136 SEPT9Q9UHD8 586 aaPredicted RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 DDX41Q9UJV9 622 aaKnown RBP11.15□□□□□ -0.62
MSH5-213ENST00000468136 ZMYM2Q9UBW7 1377 aa11.15□□□□□ -0.63
MSH5-213ENST00000468136 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
MSH5-213ENST00000468136 SOWAHDA6NJG2 315 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 BTBD19C9JJ37 291 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
MSH5-213ENST00000468136 KRT86O43790 486 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 LCA5LO95447 670 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 GGPS1O95749 300 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 GTF2H1P32780 548 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 NPTX2P47972 431 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 C1QBPQ07021 282 aaKnown RBP11.14□□□□□ -0.63
MSH5-213ENST00000468136 Q3C1V9 767 aa11.14□□□□□ -0.63
MSH5-213ENST00000468136 ZNF792Q3KQV3 632 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms