RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	AGO3	Q9H9G7	860 aa	Known RBP	13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	SUGCT	Q9HAC7	445 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	KCNMB3	Q9NPA1	279 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	DACT1	Q9NYF0	836 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	LMCD1	Q9NZU5	365 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	CCDC39	Q9UFE4	941 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	TCEAL9	Q9UHQ7	104 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	KCNH3	Q9ULD8	1083 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	TRPV2	Q9Y5S1	764 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663		A0A0C4DFX4	3053 aa		13.46	□□□□□ -0.25
CTNS-205	ENST00000467663	EYS	Q5T1H1	3165 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	LOXHD1	Q8IVV2	1947 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	WDR64	B1ANS9	1081 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663		M0QZ92	97 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	WNT7A	O00755	349 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	ENPP3	O14638	875 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	ZNF202	O95125	648 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	TDP2	O95551	362 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	PFKFB1	P16118	471 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	LIG1	P18858	919 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	UBA7	P41226	1012 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	ZNF445	P59923	1031 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	SNW1	Q13573	536 aa	Known RBP	13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	KIAA0319L	Q8IZA0	1049 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	IGSF22	Q8N9C0	903 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	TMEM60	Q9H2L4	133 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	CUEDC2	Q9H467	287 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	CLSTN2	Q9H4D0	955 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	MAGEF1	Q9HAY2	307 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	DISC1	Q9NRI5	854 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	THEG	Q9P2T0	379 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	GABBR1	Q9UBS5	961 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	PCDHA12	Q9UN75	941 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	UNC80	Q8N2C7	3258 aa		13.45	□□□□□ -0.26
CTNS-205	ENST00000467663	IGSF9B	Q9UPX0	1349 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	COL4A6	Q14031	1691 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663		A0A1B0GVL5	298 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	GAS7	O60861	476 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	NR1I2	O75469	434 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	PSMD10	O75832	226 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	UPP2	O95045	317 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	CD52	P31358	61 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	NDUFA8	P51970	172 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TMEM62	Q0P6H9	643 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TJAP1	Q5JTD0	557 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	RBM43	Q6ZSC3	357 aa	Known RBP	13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	POTED	Q86YR6	584 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	CKAP2L	Q8IYA6	745 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	MICALL1	Q8N3F8	863 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	IQUB	Q8NA54	791 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	SYMPK	Q92797	1274 aa	Known RBP	13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	SAMD11	Q96NU1	681 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	CLIC6	Q96NY7	704 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	YME1L1	Q96TA2	773 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	C17orf80	Q9BSJ5	609 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TEKT3	Q9BXF9	490 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	FTHL17	Q9BXU8	183 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TNMD	Q9H2S6	317 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TTC12	Q9H892	705 aa	Predicted RBP	13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	TMEM63C	Q9P1W3	806 aa		13.44	□□□□□ -0.26
CTNS-205	ENST00000467663	SI	P14410	1827 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	SLC37A4	O43826	429 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	ZNF862	O60290	1169 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	C22orf31	O95567	290 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	MYL1	P05976	194 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	MUT	P22033	750 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	SFN	P31947	248 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	TXK	P42681	527 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	JAK3	P52333	1124 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	LRCH2	Q5VUJ6	765 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	HAUS3	Q68CZ6	603 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	B3GNT9	Q6UX72	402 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	RDM1	Q8NG50	284 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	ERMN	Q8TAM6	284 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	ETNPPL	Q8TBG4	499 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	GDPD5	Q8WTR4	605 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	CALML4	Q96GE6	196 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	FAM167A	Q96KS9	214 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	ASB2	Q96Q27	587 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	NT5C3A	Q9H0P0	336 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	UNC45A	Q9H3U1	944 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	GOLPH3L	Q9H4A5	285 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	MTUS1	Q9ULD2	1270 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	PADI3	Q9ULW8	664 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	SAMM50	Q9Y512	469 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	CUL9	Q8IWT3	2517 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	PRUNE2	Q8WUY3	3088 aa		13.43	□□□□□ -0.26
CTNS-205	ENST00000467663	MAGEB2	O15479	319 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	CAVIN2	O95810	425 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	MRPS5	P82675	430 aa	Known RBP	13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	ZSCAN23	Q3MJ62	389 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	EPC2	Q52LR7	807 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	KRT79	Q5XKE5	535 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	CEP57L1	Q8IYX8	460 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	CRIPAK	Q8N1N5	446 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	FBXO22	Q8NEZ5	403 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	LINC01599	Q8WXQ3	324 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms