RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 ZNF862O60290 1169 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 CDC42EP1Q00587 391 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 NFX1Q12986 1120 aaKnown RBP15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 CALCRLQ16602 461 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 UGCGQ16739 394 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 B3GNT9Q6UX72 402 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 SLC24A5Q71RS6 500 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 SLFN12Q8IYM2 578 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 POP1Q99575 1024 aaKnown RBP15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 LRFN3Q9BTN0 628 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 FOXP1Q9H334 677 aaPredicted RBP15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 TMX1Q9H3N1 280 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 ELAC1Q9H777 363 aaKnown RBP15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 KIF3AQ9Y496 699 aa15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 MRPL42Q9Y6G3 142 aaKnown RBP15.78■□□□□ 0.12
CCHCR1-211ENST00000467553 ATG2AQ2TAZ0 1938 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 DENND3A2RUS2 1198 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 DDX11L8A8MPP1 907 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 ZBTB42B2RXF5 422 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 H3BQ06 376 aaPredicted RBP15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 WNT7AO00755 349 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 OATP04181 439 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 IL9P15248 144 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 GJB2P29033 226 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 MCM7P33993 719 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 PRKCEQ02156 737 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 PPP2R5CQ13362 524 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 NCAPH2Q6IBW4 605 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 PDE12Q6L8Q7 609 aaKnown RBP15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 METTL13Q8N6R0 699 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 SPPL3Q8TCT6 385 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 ST3GAL5Q9UNP4 418 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 SMC3Q9UQE7 1217 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 PCDHB12Q9Y5F1 795 aa15.77■□□□□ 0.12
CCHCR1-211ENST00000467553 C19orf67A6NJJ6 358 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 HOXA2O43364 376 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 C22orf31O95567 290 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 SSTR3P32745 418 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 LTBRP36941 435 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 PLA2G5P39877 138 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 TXKP42681 527 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 FAM189BP81408 668 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 HYAL1Q12794 435 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 ZNF174Q15697 407 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 SMAD2Q15796 467 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 MCTP1Q6DN14 999 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 EP400NLQ6ZTU2 488 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 ADHFE1Q8IWW8 467 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 FAM122AQ96E09 287 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 MAP7D2Q96T17 732 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 ADAM2Q99965 735 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 CD320Q9NPF0 282 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 VAV3Q9UKW4 847 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 PCDHA12Q9UN75 941 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 GINS2Q9Y248 185 aa15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 NOC2LQ9Y3T9 749 aaKnown RBP15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 FNDC1Q4ZHG4 1894 aaPredicted RBP15.76■□□□□ 0.11
CCHCR1-211ENST00000467553 KIAA1671Q9BY89 1806 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 PRR33A8MZF0 331 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 C9IYK1 514 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 NEMFO60524 1076 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 GPR32O75388 356 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 ITGB1P05556 798 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 PSMC5P62195 406 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 ADAM15Q13444 863 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 SMAD4Q13485 552 aaKnown RBP15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 EPHA7Q15375 998 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 MTERF2Q49AM1 385 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 XKR3Q5GH77 459 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 EFCAB12Q6NXP0 572 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 NOSTRINQ8IVI9 506 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 KLHL23Q8NBE8 558 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 RSPH1Q8WYR4 309 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 PPP1R16BQ96T49 567 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 ALG13Q9NP73 1137 aaKnown RBP15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 TMEM161AQ9NX61 479 aa15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 SEPT9Q9UHD8 586 aaPredicted RBP15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.75■□□□□ 0.11
CCHCR1-211ENST00000467553 TMEM150BA6NC51 233 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 H3BQV1 296 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 P4HBP07237 508 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 ZSCAN20P17040 1043 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 QARSP47897 775 aaKnown RBP15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 ZP2Q05996 745 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 CAMK1Q14012 370 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 KIZQ2M2Z5 673 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 TMEM266Q2M3C6 531 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 LINC01465Q8N7H1 131 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 EFHBQ8N7U6 833 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 POF1BQ8WVV4 589 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 DYDC2Q96IM9 177 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 CDCA3Q99618 268 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 SH2D3AQ9BRG2 576 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 TMEM60Q9H2L4 133 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 TTC12Q9H892 705 aaPredicted RBP15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 CDHR5Q9HBB8 845 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 ATP6V0A4Q9HBG4 840 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 RGL1Q9NZL6 768 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 CD207Q9UJ71 328 aa15.74■□□□□ 0.11
CCHCR1-211ENST00000467553 NOL7Q9UMY1 257 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms