RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 GALNT7Q86SF2 657 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 EFCAB13Q8IY85 973 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ESX1Q8N693 406 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 PCSK9Q8NBP7 692 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 CACTINQ8WUQ7 758 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 TEKT4Q8WW24 435 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ASB12Q8WXK4 309 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 LRGUKQ96M69 825 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 INTS7Q9NVH2 962 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 UBAP1Q9NZ09 502 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 SSX2IPQ9Y2D8 614 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 FLT1P17948 1338 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 PPIP5K1Q6PFW1 1433 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 B4DLN1 442 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 TBCAO75347 108 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 APBA3O96018 575 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 TUBP50607 506 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 CD83Q01151 205 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ADAM15Q13444 863 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 CNNM4Q6P4Q7 775 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 XKR5Q6UX68 686 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ANGPTL8Q6UXH0 198 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ZMIZ2Q8NF64 920 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 CTNNBL1Q8WYA6 563 aaPredicted RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 SLF1Q9BQI6 1058 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 TRIT1Q9H3H1 467 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ATP13A1Q9HD20 1204 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 FAM8A1Q9UBU6 413 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ADAM21Q9UKJ8 722 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ZNF711Q9Y462 761 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 HNRNPCL2B2RXH8 293 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 HNRNPCL1O60812 293 aaKnown RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ATP5F1P24539 256 aaPredicted RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ATP5OP48047 213 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 RAB12Q6IQ22 244 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 ATCAYQ86WG3 371 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 TRIM42Q8IWZ5 723 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 GALNT12Q8IXK2 581 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 C8orf58Q8NAV2 365 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 GOT1L1Q8NHS2 421 aaPredicted RBP8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 SLC39A7Q92504 469 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 SLC10A4Q96EP9 437 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 POLIQ9UNA4 740 aa8.36□□□□□ -1.07
SPTBN1-204ENST00000467371 KDM5AP29375 1690 aaKnown RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 SRGAP2O75044 1071 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 SASH3O75995 380 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 USP17L7P0C7H9 530 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 GSPT1P15170 499 aaKnown RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 VEGFAP15692 232 aaPredicted RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 CCNFP41002 786 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 LIFRP42702 1097 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 GSK3AP49840 483 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 ZNF75DP51815 510 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 DRG2P55039 364 aaKnown RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 TMPRSS15P98073 1019 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 SLC5A9Q2M3M2 681 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 CTC1Q2NKJ3 1217 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 OTUD7BQ6GQQ9 843 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 PKN3Q6P5Z2 889 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 ARHGAP27Q6ZUM4 889 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 PPM1NQ8N819 430 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 ACMSDQ8TDX5 336 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 FUBP3Q96I24 572 aaKnown RBP eCLIP8.35□□□□□ -1.075e-8■■□□□ 11.6
SPTBN1-204ENST00000467371 FAXDC2Q96IV6 333 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 TMX3Q96JJ7 454 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 WDR24Q96S15 920 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 CRTAC1Q9NQ79 661 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 WASH6PQ9NQA3 447 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 ORC3Q9UBD5 711 aaPredicted RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 RTL1A6NKG5 1358 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 USP27XA6NNY8 438 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 UBXN8O00124 270 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 MAP7Q14244 749 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 TWISTNBQ3B726 338 aaPredicted RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 FNDC3BQ53EP0 1204 aaKnown RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 CCHCR1Q8TD31 782 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 ACAD9Q9H845 621 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 C1orf112Q9NSG2 853 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 INTS10Q9NVR2 710 aaKnown RBP8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 UBP1Q9NZI7 540 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 EXTL2Q9UBQ6 330 aa8.35□□□□□ -1.07
SPTBN1-204ENST00000467371 SLC12A8A0AV02 714 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 K7ESF4 209 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 URI1O94763 535 aaPredicted RBP8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 LTFP02788 710 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 TMEM11P17152 192 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 PSMA4P25789 261 aaKnown RBP8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 KRT9P35527 623 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 AMPHP49418 695 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 FCRLBQ6BAA4 426 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 C16orf46Q6P387 395 aa8.34□□□□□ -1.07
SPTBN1-204ENST00000467371 HEATR4Q86WZ0 1026 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms