RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 WDR33Q9C0J8 1336 aaKnown RBP6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 ASMTLO95671 621 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 IRF9Q00978 393 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 TUBA3CQ13748 450 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 FNDC7Q5VTL7 733 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 SPTY2D1Q68D10 685 aaPredicted RBP6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 CC2D1AQ6P1N0 951 aaPredicted RBP6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 TUBA3EQ6PEY2 450 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 FGD2Q7Z6J4 655 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 D2HGDHQ8N465 521 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 C2orf69Q8N8R5 385 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 IGSF22Q8N9C0 903 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 MPHOSPH9Q99550 1183 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 HECAQ9UBI9 543 aaPredicted RBP6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 GIT1Q9Y2X7 761 aa6.56□□□□□ -1.36
PRPF40A-205ENST00000467114 RAPGEF3O95398 923 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 MECP2P51608 486 aaKnown RBP6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 ADCY7P51828 1080 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 SESN2P58004 480 aaPredicted RBP6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 ADAM15Q13444 863 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 RIN1Q13671 783 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 SAFB2Q14151 953 aaKnown RBP eCLIP6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 EGFLAMQ63HQ2 1017 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 KLHDC10Q6PID8 442 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 TMPRSS6Q8IU80 811 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 THEMISQ8N1K5 641 aaPredicted RBP6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 TMEM176AQ96HP8 235 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 BOCQ9BWV1 1114 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 CEP72Q9P209 647 aa6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 TMA7Q9Y2S6 64 aaKnown RBP6.55□□□□□ -1.36
PRPF40A-205ENST00000467114 LOC105371045A0A1W2PR82 267 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 CAPN14A8MX76 684 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 CYP27B1O15528 508 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 DNAJC8O75937 253 aaPredicted RBP6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 SDSP20132 328 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 HSD3B2P26439 372 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 FNTBP49356 437 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 TCEA2Q15560 299 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 SLC6A15Q9H2J7 730 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 IKZF4Q9H2S9 585 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 CD2APQ9Y5K6 639 aa6.54□□□□□ -1.36
PRPF40A-205ENST00000467114 CDC45O75419 566 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 PRLP01236 227 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 PABPC4Q13310 644 aaKnown RBP eCLIP6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 ARHGAP44Q17R89 818 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 ERCC4Q92889 916 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 GFM2Q969S9 779 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 E2F7Q96AV8 911 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 SLC7A6OSQ96CW6 309 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 FEZ1Q99689 392 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 SAE1Q9UBE0 346 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 SH3BP1Q9Y3L3 701 aa6.53□□□□□ -1.36
PRPF40A-205ENST00000467114 H2AFYO75367 372 aaKnown RBP6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 INHBCP55103 352 aa6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 ATP2C1P98194 919 aaPredicted RBP6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 ZNF483Q8TF39 744 aaPredicted RBP6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 NINJ1Q92982 152 aa6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 MMRN2Q9H8L6 949 aa6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 C11orf21Q9P2W6 132 aa6.52□□□□□ -1.37
PRPF40A-205ENST00000467114 A0A1W2PRX2 142 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 PEX11BO96011 259 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 MAKP20794 623 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 STAT3P40763 770 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 ADAM8P78325 824 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 RRP1BQ14684 758 aaKnown RBP6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 SMN1Q16637 294 aaKnown RBP6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 ANKRD35Q8N283 1001 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 LARP4BQ92615 738 aaKnown RBP6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 NKD2Q969F2 451 aaPredicted RBP6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 PARPBPQ9NWS1 579 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 DENND2AQ9ULE3 1009 aa6.51□□□□□ -1.37
PRPF40A-205ENST00000467114 C2orf78A6NCI8 922 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 DVL2O14641 736 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 ADH4P08319 380 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 POU3F2P20265 443 aaPredicted RBP6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 RGS3P49796 1198 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 INHBEP58166 350 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 ANTXR2P58335 489 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 SLC6A3Q01959 620 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 ROM1Q03395 351 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 ACAP1Q15027 740 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 ZCCHC8Q6NZY4 707 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 OR5AN1Q8NGI8 311 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 MAML3Q96JK9 1138 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 GPHA2Q96T91 129 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 ORAI3Q9BRQ5 295 aa6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 INTS7Q9NVH2 962 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-205ENST00000467114 A0A087X0B3 334 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 B4E1Z4 1266 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 KIF11P52732 1056 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 DGKDQ16760 1214 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 DDX53Q86TM3 631 aaKnown RBP6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 LDLRAD3Q86YD5 345 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 GCDHQ92947 438 aaPredicted RBP6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 MIEF2Q96C03 454 aa6.49□□□□□ -1.37
PRPF40A-205ENST00000467114 ACSS2Q9NR19 701 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms