RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 RECQL4O94761 1208 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 JAM2P57087 298 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 TAP1Q03518 808 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 TCIRG1Q13488 830 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 ACAP1Q15027 740 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 GAGE13Q4V321 117 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 PLEKHG4Q58EX7 1191 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 FAM47CQ5HY64 1035 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 NBPF6Q5VWK0 638 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 KRT40Q6A162 431 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 HTR3DQ70Z44 454 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 MAMDC2Q7Z304 686 aaPredicted RBP6.25□□□□□ -1.41
XRN1-206ENST00000467077 ELOA2Q8IYF1 753 aaPredicted RBP6.25□□□□□ -1.41
XRN1-206ENST00000467077 SUPT20HQ8NEM7 779 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 CPT1CQ8TCG5 803 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 ASB15Q8WXK1 588 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 NBPF4Q96M43 638 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 GBP4Q96PP9 640 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 SAE1Q9UBE0 346 aaPredicted RBP6.25□□□□□ -1.41
XRN1-206ENST00000467077 ASB1Q9Y576 335 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 HS3ST4Q9Y661 456 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 USP14P54578 494 aa6.24□□□□□ -1.41
XRN1-206ENST00000467077 C16orf59Q7L2K0 433 aa6.24□□□□□ -1.41
XRN1-206ENST00000467077 NELL1Q92832 810 aa6.24□□□□□ -1.41
XRN1-206ENST00000467077 SYNPO2LQ9H987 977 aa6.24□□□□□ -1.41
XRN1-206ENST00000467077 CBLCQ9ULV8 474 aa6.24□□□□□ -1.41
XRN1-206ENST00000467077 SORCS3Q9UPU3 1222 aa6.24□□□□□ -1.41
XRN1-206ENST00000467077 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 FOXP2O15409 715 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 NAT1P18440 290 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 NR4A1P22736 598 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 ETFBP38117 255 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 DENND2AQ9ULE3 1009 aa6.23□□□□□ -1.41
XRN1-206ENST00000467077 SCDO00767 359 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 SRGAP2CP0DJJ0 459 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 GYPEP15421 78 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 LAG3P18627 525 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 GNAT2P19087 354 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 ERCC6LQ2NKX8 1250 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 LRRC47Q8N1G4 583 aaKnown RBP6.22□□□□□ -1.41
XRN1-206ENST00000467077 R3HDMLQ9H3Y0 253 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 RSAD1Q9HA92 442 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 ST7Q9NRC1 585 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 KCNH7Q9NS40 1196 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 PCDHA8Q9Y5H6 950 aa6.22□□□□□ -1.41
XRN1-206ENST00000467077 CCDC66A2RUB6 948 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 PROB1E7EW31 1015 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 SCAF4O95104 1147 aaKnown RBP6.21□□□□□ -1.42
XRN1-206ENST00000467077 CLK3P49761 638 aaKnown RBP6.21□□□□□ -1.42
XRN1-206ENST00000467077 GUCY1A3Q02108 690 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 DCAF17Q5H9S7 520 aaPredicted RBP6.21□□□□□ -1.42
XRN1-206ENST00000467077 Q6YL49 198 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 BCL6BQ8N143 479 aaPredicted RBP6.21□□□□□ -1.42
XRN1-206ENST00000467077 MDGA1Q8NFP4 955 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 PCDH19Q8TAB3 1148 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 ZNF512Q96ME7 567 aaPredicted RBP6.21□□□□□ -1.42
XRN1-206ENST00000467077 SMURF1Q9HCE7 757 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 INSL6Q9Y581 213 aa6.21□□□□□ -1.42
XRN1-206ENST00000467077 GRXCR1A8MXD5 290 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 TRIM24O15164 1050 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 AVPR1BP47901 424 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 DNM2P50570 870 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 ADAM8P78325 824 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 HDGFL2Q7Z4V5 671 aaPredicted RBP6.2□□□□□ -1.42
XRN1-206ENST00000467077 ZC3H7AQ8IWR0 971 aaKnown RBP6.2□□□□□ -1.42
XRN1-206ENST00000467077 ST8SIA2Q92186 375 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 NCDNQ9UBB6 729 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 SFMBT1Q9UHJ3 866 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 COL4A3Q01955 1670 aa6.2□□□□□ -1.42
XRN1-206ENST00000467077 C2orf78A6NCI8 922 aa6.19□□□□□ -1.42
XRN1-206ENST00000467077 ARVCFO00192 962 aa6.19□□□□□ -1.42
XRN1-206ENST00000467077 YOD1Q5VVQ6 348 aaPredicted RBP6.19□□□□□ -1.42
XRN1-206ENST00000467077 NAIF1Q69YI7 327 aaPredicted RBP6.19□□□□□ -1.42
XRN1-206ENST00000467077 FBXO42Q6P3S6 717 aa6.19□□□□□ -1.42
XRN1-206ENST00000467077 MICALCLQ6ZW33 695 aa6.19□□□□□ -1.42
XRN1-206ENST00000467077 LCORLQ8N3X6 602 aa6.19□□□□□ -1.42
XRN1-206ENST00000467077 CISD2Q8N5K1 135 aaKnown RBP6.19□□□□□ -1.42
XRN1-206ENST00000467077 PTPRN2Q92932 1015 aa6.19□□□□□ -1.42
XRN1-206ENST00000467077 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.19□□□□□ -1.422e-6■■□□□ 13.2
XRN1-206ENST00000467077 TOX4O94842 621 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 C1RP00736 705 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 APPP05067 770 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 VSIG10L2P0DP72 767 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 CTGFP29279 349 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 SEC23AQ15436 765 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 DDR2Q16832 855 aa6.18□□□□□ -1.42
XRN1-206ENST00000467077 ERCC4Q92889 916 aaPredicted RBP6.18□□□□□ -1.42
XRN1-206ENST00000467077 EIF2B4Q9UI10 523 aaKnown RBP6.18□□□□□ -1.42
XRN1-206ENST00000467077 HK1P19367 917 aa6.17□□□□□ -1.42
XRN1-206ENST00000467077 DGKDQ16760 1214 aa6.17□□□□□ -1.42
XRN1-206ENST00000467077 NOSTRINQ8IVI9 506 aa6.17□□□□□ -1.42
XRN1-206ENST00000467077 ST13P5Q8NFI4 369 aaPredicted RBP6.17□□□□□ -1.42
XRN1-206ENST00000467077 OR5AN1Q8NGI8 311 aa6.17□□□□□ -1.42
XRN1-206ENST00000467077 ZNF408Q9H9D4 720 aa6.17□□□□□ -1.42
XRN1-206ENST00000467077 MAGEL2Q9UJ55 1249 aa6.17□□□□□ -1.42
XRN1-206ENST00000467077 HIP1RO75146 1068 aa6.16□□□□□ -1.42
XRN1-206ENST00000467077 JUNP05412 331 aaKnown RBP6.16□□□□□ -1.42
XRN1-206ENST00000467077 ZEB1P37275 1124 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms