RNA–Protein interactions for RNA: ENST00000467044.1

NUP188-204, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-204ENST00000467044 TBC1D7Q9P0N9 293 aa11.9□□□□□ -0.5
NUP188-204ENST00000467044 GTF2IRD1Q9UHL9 959 aa11.9□□□□□ -0.5
NUP188-204ENST00000467044 MAN1B1Q9UKM7 699 aa11.9□□□□□ -0.5
NUP188-204ENST00000467044 KIAA0100Q14667 2235 aaKnown RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 GAS2O43903 313 aaKnown RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 GAP43P17677 238 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 PEX3P56589 373 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 PTPN11Q06124 597 aaPredicted RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 COASYQ13057 564 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 MAPK7Q13164 816 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 DRP2Q13474 957 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 ODR4Q5SWX8 454 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 GDF6Q6KF10 455 aaPredicted RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 RBM43Q6ZSC3 357 aaKnown RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 SFR1Q86XK3 245 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 DAW1Q8N136 415 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 ANKLE1Q8NAG6 615 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 HPS3Q969F9 1004 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 IFT74Q96LB3 600 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 FAM49AQ9H0Q0 323 aaPredicted RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 SUCLA2Q9P2R7 463 aaPredicted RBP11.89□□□□□ -0.51
NUP188-204ENST00000467044 NOD1Q9Y239 953 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 AKT3Q9Y243 479 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 PCDHA2Q9Y5H9 948 aa11.89□□□□□ -0.51
NUP188-204ENST00000467044 IGKV6-21A0A0C4DH24 114 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 CCDC169A6NNP5 214 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 ARVCFO00192 962 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 PLS3P13797 630 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 ARL2P36404 184 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 ATN1P54259 1190 aaPredicted RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 ADAM17P78536 824 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 PSMD2Q13200 908 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 KCNB1Q14721 858 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 PTGISQ16647 500 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 NT5DC1Q5TFE4 455 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 SESTD1Q86VW0 696 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 RHPN2Q8IUC4 686 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 FAM178BQ8IXR5 827 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 SPATA20Q8TB22 786 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 DIS3LQ8TF46 1054 aaKnown RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 PRPF31Q8WWY3 499 aaKnown RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 PSPC1Q8WXF1 523 aaKnown RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 PAWRQ96IZ0 340 aaKnown RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 MAP7D2Q96T17 732 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 MRPL44Q9H9J2 332 aaKnown RBP11.88□□□□□ -0.51
NUP188-204ENST00000467044 SLC39A2Q9NP94 309 aa11.88□□□□□ -0.51
NUP188-204ENST00000467044 SMIM35A0A1B0GVV1 85 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 FRMD3A2A2Y4 597 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 MBLAC1A4D2B0 266 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 LRRIQ4A6NIV6 560 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 ASAP2O43150 1006 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 RHOBTB3O94955 611 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 VTNP04004 478 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 SRGAP2CP0DJJ0 459 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 CAPN2P17655 700 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 GLRA2P23416 452 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 NMT1P30419 496 aaKnown RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 HOXC8P31273 242 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 ZNF131P52739 623 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 SMTNP53814 917 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 NLRP12P59046 1061 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 LAMTOR4Q0VGL1 99 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 DMP1Q13316 513 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 MORC3Q14149 939 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 MXD4Q14582 209 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 PPP2R5AQ15172 486 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 FAM26FQ5R3K3 315 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 COL13A1Q5TAT6 717 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 ZNF658Q5TYW1 1059 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 RUFY4Q6ZNE9 571 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 KSR1Q8IVT5 923 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 KIAA0319LQ8IZA0 1049 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 TRIML1Q8N9V2 468 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 ASAP3Q8TDY4 903 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 DNAJB3Q8WWF6 145 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 BSNDQ8WZ55 320 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 ZNF668Q96K58 619 aaPredicted RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 PPP1R16BQ96T49 567 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 ANP32EQ9BTT0 268 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 C11orf49Q9H6J7 331 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 C17orf75Q9HAS0 396 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 KMT5AQ9NQR1 393 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 TRMT13Q9NUP7 481 aaKnown RBP11.87□□□□□ -0.51
NUP188-204ENST00000467044 SEL1LQ9UBV2 794 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 GDAQ9Y2T3 454 aa11.87□□□□□ -0.51
NUP188-204ENST00000467044 K7ENM7 598 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 SLC16A4O15374 487 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 GCNT3O95395 438 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 CCDC192P0DO97 292 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 EN2P19622 333 aaPredicted RBP11.86□□□□□ -0.51
NUP188-204ENST00000467044 NPTX2P47972 431 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 RTP1P59025 263 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 TYRO3Q06418 890 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 TMEM62Q0P6H9 643 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 STK4Q13043 487 aa11.86□□□□□ -0.51
NUP188-204ENST00000467044 TFDP1Q14186 410 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms