RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 ABCD1P33897 745 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 MCM4P33991 863 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 CLCN3P51790 818 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 ZNF131P52739 623 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 MKRN4PQ13434 485 aaPredicted RBP18.1■□□□□ 0.49
HLA-C-205ENST00000466892 TFDP1Q14186 410 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 PCBP1Q15365 356 aaKnown RBP eCLIP18.1■□□□□ 0.492e-25■■□□□ 14.4
HLA-C-205ENST00000466892 ARSHQ5FYA8 562 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 FAM102BQ5T8I3 360 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 SH3RF1Q7Z6J0 888 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 LRRC71Q8N4P6 559 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 SLC17A8Q8NDX2 589 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 PPP1R13LQ8WUF5 828 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 DNAJB3Q8WWF6 145 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 DDX12PQ92771 950 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 C7orf25Q9BPX7 421 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 NOC4LQ9BVI4 516 aaKnown RBP18.1■□□□□ 0.49
HLA-C-205ENST00000466892 NFKBIZQ9BYH8 718 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 TRIM9Q9C026 710 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 HIPK3Q9H422 1215 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 LARSQ9P2J5 1176 aaKnown RBP18.1■□□□□ 0.49
HLA-C-205ENST00000466892 SERTAD1Q9UHV2 236 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 AKT3Q9Y243 479 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 COL4A3BPQ9Y5P4 624 aa18.1■□□□□ 0.49
HLA-C-205ENST00000466892 TBCAO75347 108 aaKnown RBP18.09■□□□□ 0.49
HLA-C-205ENST00000466892 CKBP12277 381 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 SELPP16109 830 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 THPOP40225 353 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 MRPS6P82932 125 aaKnown RBP18.09■□□□□ 0.49
HLA-C-205ENST00000466892 GIT2Q14161 759 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 USP38Q8NB14 1042 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 PRPF31Q8WWY3 499 aaKnown RBP18.09■□□□□ 0.49
HLA-C-205ENST00000466892 KCNN1Q92952 543 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 PAGE5Q96GU1 130 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 IFT74Q96LB3 600 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 FAM49AQ9H0Q0 323 aaPredicted RBP18.09■□□□□ 0.49
HLA-C-205ENST00000466892 POLR3FQ9H1D9 316 aaPredicted RBP18.09■□□□□ 0.49
HLA-C-205ENST00000466892 SEL1LQ9UBV2 794 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 NR2E3Q9Y5X4 410 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 LOXHD1Q8IVV2 1947 aa18.09■□□□□ 0.49
HLA-C-205ENST00000466892 MYH9P35579 1960 aaKnown RBP18.08■□□□□ 0.49
HLA-C-205ENST00000466892 PVALEFA0A1B0GWK0 134 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 FRMD3A2A2Y4 597 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 MYMKA6NI61 221 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 H0YCG3 227 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 HIP1RO75146 1068 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 NR1I2O75469 434 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 TIMP1P01033 207 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 GAP43P17677 238 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 LIG1P18858 919 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 RFC2P35250 354 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 NAMPTP43490 491 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 MAPK7Q13164 816 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 DHX8Q14562 1220 aaKnown RBP18.08■□□□□ 0.48
HLA-C-205ENST00000466892 IFNLR1Q8IU57 520 aaPredicted RBP18.08■□□□□ 0.48
HLA-C-205ENST00000466892 TMEM143Q96AN5 459 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 REEP2Q9BRK0 252 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 NTPCRQ9BSD7 190 aaKnown RBP18.08■□□□□ 0.48
HLA-C-205ENST00000466892 CELF4Q9BZC1 486 aaKnown RBP18.08■□□□□ 0.48
HLA-C-205ENST00000466892 INO80BQ9C086 356 aaPredicted RBP18.08■□□□□ 0.48
HLA-C-205ENST00000466892 PARVGQ9HBI0 331 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 TRPV2Q9Y5S1 764 aa18.08■□□□□ 0.48
HLA-C-205ENST00000466892 RSPH10B2B2RC85 870 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
HLA-C-205ENST00000466892 GPR32O75388 356 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 RSPH10BP0C881 870 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 PLS3P13797 630 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 GPC3P51654 580 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 CRYBB1P53674 252 aaPredicted RBP18.07■□□□□ 0.48
HLA-C-205ENST00000466892 MGAT3Q09327 533 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 LAMTOR4Q0VGL1 99 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 DMP1Q13316 513 aaPredicted RBP18.07■□□□□ 0.48
HLA-C-205ENST00000466892 DRP2Q13474 957 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 ODR4Q5SWX8 454 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 LRRC8DQ7L1W4 858 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 RHPN2Q8IUC4 686 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 DAW1Q8N136 415 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 SPIRE2Q8WWL2 714 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 WNT8BQ93098 351 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 DNAJC19Q96DA6 116 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 ZBTB10Q96DT7 871 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 C2orf40Q9H1Z8 148 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 DACT1Q9NYF0 836 aa18.07■□□□□ 0.48
HLA-C-205ENST00000466892 FAM13AO94988 1023 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 VTNP04004 478 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 MAPTP10636 758 aaKnown RBP18.06■□□□□ 0.48
HLA-C-205ENST00000466892 RAG1P15918 1043 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 GLRA2P23416 452 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 PHKA2P46019 1235 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 EFNA5P52803 228 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 SMTNP53814 917 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 POSTNQ15063 836 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 ZNF618Q5T7W0 954 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 TRAF7Q6Q0C0 670 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 CCDC65Q8IXS2 484 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 DPF3Q92784 378 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 GCOM2Q9BZD3 368 aaPredicted RBP18.06■□□□□ 0.48
HLA-C-205ENST00000466892 GTPBP4Q9BZE4 634 aaKnown RBP18.06■□□□□ 0.48
HLA-C-205ENST00000466892 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
HLA-C-205ENST00000466892 GPRC5CQ9NQ84 441 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms