RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 FAM83GA6ND36 823 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 CBX4O00257 560 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 ASLP04424 464 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 SLC6A3Q01959 620 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 ROM1Q03395 351 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 FHL2Q14192 279 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 EPHA7Q15375 998 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 LSM12Q3MHD2 195 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 DDX53Q86TM3 631 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 TMPRSS6Q8IU80 811 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 TMEM176AQ96HP8 235 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 DNAJC2Q99543 621 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 PITHD1Q9GZP4 211 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 SLC6A15Q9H2J7 730 aa4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 AURKAIP1Q9NWT8 199 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 TNPO3Q9Y5L0 923 aaKnown RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 CAPN14A8MX76 684 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 B4E1Z4 1266 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 KRT37O76014 449 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 SDSP20132 328 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 PTX3P26022 381 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 HIBADHP31937 336 aaKnown RBP4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 SESN2P58004 480 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 ATP2C1P98194 919 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 ACAP1Q15027 740 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 SLFN12LQ6IEE8 588 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 CLEC14AQ86T13 490 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 LDLRAD3Q86YD5 345 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 D2HGDHQ8N465 521 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 KIAA1958Q8N8K9 716 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 WDR48Q8TAF3 677 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 MPHOSPH9Q99550 1183 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 ORAI3Q9BRQ5 295 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 ACSS2Q9NR19 701 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 POLR3BQ9NW08 1133 aaPredicted RBP4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 TMEM260Q9NX78 707 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 B4GALT6Q9UBX8 382 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 MAGEL2Q9UJ55 1249 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 DENND2AQ9ULE3 1009 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 GIT1Q9Y2X7 761 aa4.6□□□□□ -1.67
GTF3C3-209ENST00000466862 PTPDC1A2A3K4 754 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 TCIRG1Q13488 830 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 TUBA3CQ13748 450 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 RRP1BQ14684 758 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 BMS1Q14692 1282 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 DGKDQ16760 1214 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 GAGE13Q4V321 117 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 C1QL3Q5VWW1 255 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 TUBA3EQ6PEY2 450 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 Q6ZPA2 131 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 Q6ZRM9 215 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 HTR3DQ70Z44 454 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 KANSL1Q7Z3B3 1105 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 BMP8AQ7Z5Y6 402 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 GFM2Q969S9 779 aaKnown RBP4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 E2F7Q96AV8 911 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 PLEKHG4BQ96PX9 1271 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 CSRNP2Q9H175 543 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 KCMF1Q9P0J7 381 aa4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 SAE1Q9UBE0 346 aaPredicted RBP4.59□□□□□ -1.67
GTF3C3-209ENST00000466862 A0A1W2PRX2 142 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 RFPL3O75679 317 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 APPP05067 770 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 SCNN1GP51170 649 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 BPIFB4P59827 614 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 SLC25A3Q00325 362 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 PURAQ00577 322 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 TTC38Q5R3I4 469 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 PIK3R6Q5UE93 754 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 SH3TC2Q8TF17 1288 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 ZNF483Q8TF39 744 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 SREK1Q8WXA9 508 aaKnown RBP4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 CHFRQ96EP1 664 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 TRIM8Q9BZR9 551 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 PCIF1Q9H4Z3 704 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 ZMAT4Q9H898 229 aa4.58□□□□□ -1.68
GTF3C3-209ENST00000466862 A0A0A6YYK5 440 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 KLRG2A4D1S0 409 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 H7C1D1 291 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 PPP1R12AO14974 1030 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 CYP27B1O15528 508 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 OPA1O60313 960 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 H2AFYO75367 372 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 CYP17A1P05093 508 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 MCM7P33993 719 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 RABGGTBP53611 331 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 DPTQ07507 201 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 PABPC4Q13310 644 aaKnown RBP eCLIP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 TOB2Q14106 344 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 NFE2L2Q16236 605 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 PRAMEF9Q5VWM5 478 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 SGMS1Q86VZ5 419 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 ANKRD53Q8N9V6 530 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 LARP4BQ92615 738 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 DYDC2Q96IM9 177 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 ELF4Q99607 663 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 SOX7Q9BT81 388 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 MMRN2Q9H8L6 949 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 IL23AQ9NPF7 189 aa4.57□□□□□ -1.68
GTF3C3-209ENST00000466862 RBM8AQ9Y5S9 174 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms