RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 KCNG1Q9UIX4 513 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 PCDHA2Q9Y5H9 948 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 PTCH2Q9Y6C5 1203 aa13.39□□□□□ -0.27
VPS16-206ENST00000466415 TRIM49BA6NDI0 452 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 H0YCG3 227 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 PRPF6O94906 941 aaKnown RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 FGFR1OPO95684 399 aaKnown RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 F2P00734 622 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 INSRRP14616 1297 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 PSEN2P49810 448 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 DNM2P50570 870 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 CASP5P51878 434 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 RTP1P59025 263 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 MFSD10Q14728 455 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 NCAPHQ15003 741 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 GRIK4Q16099 956 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 MAP3K21Q5TCX8 1036 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 GLIS3Q8NEA6 775 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 NOC3LQ8WTT2 800 aaKnown RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 TMEM143Q96AN5 459 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 UPF3AQ9H1J1 476 aaKnown RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 RNPEPQ9H4A4 650 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 SUGCTQ9HAC7 445 aa13.38□□□□□ -0.27
VPS16-206ENST00000466415 DDX20Q9UHI6 824 aaKnown RBP13.38□□□□□ -0.27
VPS16-206ENST00000466415 MAGEB2O15479 319 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 CALUO43852 315 aaPredicted RBP13.37□□□□□ -0.27
VPS16-206ENST00000466415 MSCO60682 206 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 PGK1P00558 417 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 ABCD1P33897 745 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 NCKAP1LP55160 1127 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 SOX10P56693 466 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 GNASQ5JWF2 1037 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 IER5Q5VY09 327 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 EPM2AIP1Q7L775 607 aaPredicted RBP13.37□□□□□ -0.27
VPS16-206ENST00000466415 ZNF720Q7Z2F6 126 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 FAM114A1Q8IWE2 563 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 SYCP3Q8IZU3 236 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 METTL13Q8N6R0 699 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 DEPTORQ8TB45 409 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 TRAPPC12Q8WVT3 735 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 SPIRE2Q8WWL2 714 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 PSPC1Q8WXF1 523 aaKnown RBP13.37□□□□□ -0.27
VPS16-206ENST00000466415 HVCN1Q96D96 273 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 MTG1Q9BT17 334 aaPredicted RBP13.37□□□□□ -0.27
VPS16-206ENST00000466415 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
VPS16-206ENST00000466415 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 FANCLQ9NW38 375 aa13.37□□□□□ -0.27
VPS16-206ENST00000466415 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
VPS16-206ENST00000466415 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 RRN3P2A6NIE6 340 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 LRRIQ4A6NIV6 560 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 SLC16A4O15374 487 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 C22orf31O95567 290 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 SERPINC1P01008 464 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 TMOD1P28289 359 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 NAMPTP43490 491 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 NPTX2P47972 431 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 SPAG1Q07617 926 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 TFDP1Q14186 410 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 KNOP1Q1ED39 458 aaKnown RBP13.36□□□□□ -0.27
VPS16-206ENST00000466415 ZC2HC1CQ53FD0 456 aaPredicted RBP13.36□□□□□ -0.27
VPS16-206ENST00000466415 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 CENPPQ6IPU0 288 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 HS2ST1Q7LGA3 356 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 HAUS6Q7Z4H7 955 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 RNF180Q86T96 592 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 LRRC71Q8N4P6 559 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 ZNF507Q8TCN5 953 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 ACCSQ96QU6 501 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 TRIM5Q9C035 493 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 SEMA6BQ9H3T3 888 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 TMEM206Q9H813 350 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 TYW1Q9NV66 732 aaKnown RBP13.36□□□□□ -0.27
VPS16-206ENST00000466415 EXOC7Q9UPT5 735 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 PTPN22Q9Y2R2 807 aa13.36□□□□□ -0.27
VPS16-206ENST00000466415 DENND3A2RUS2 1198 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 ZBTB42B2RXF5 422 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 CBFA2T2O43439 604 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 SCP2P22307 547 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 KLRC1P26715 233 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 ARL2P36404 184 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 CLCN3P51790 818 aa13.35□□□□□ -0.27
VPS16-206ENST00000466415 PMS1P54277 932 aaKnown RBP13.35□□□□□ -0.27
VPS16-206ENST00000466415 IRX5P78411 483 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms