RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 GH2P01242 217 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 COPB2P35606 906 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 KCNJ6P48051 423 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 DOCK1Q14185 1865 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 RAB3GAP1Q15042 981 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 IFI16Q16666 785 aaKnown RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 ATP2B3Q16720 1220 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 PDS5AQ29RF7 1337 aaKnown RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 TIGD5Q53EQ6 642 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 EP400NLQ6ZTU2 488 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 ASCL5Q7RTU5 278 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 METTL16Q86W50 562 aaKnown RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 PI4K2BQ8TCG2 481 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 GPBAR1Q8TDU6 330 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 GDPD5Q8WTR4 605 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 TGS1Q96RS0 853 aaKnown RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 CRBNQ96SW2 442 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 FSD1Q9BTV5 496 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 SRCIN1Q9C0H9 1055 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 CABP5Q9NP86 173 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 ZHX1Q9UKY1 873 aaPredicted RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 EYA2O00167 538 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 BAIAP3O94812 1187 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 ITIH2P19823 946 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 GJA9P57773 515 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 HNRNPUQ00839 825 aaKnown RBP eCLIP7.13□□□□□ -1.27
NCL-208ENST00000466274 MECOMQ03112 1051 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 ITGA7Q13683 1181 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 RABL6Q3YEC7 729 aaPredicted RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 DEFB128Q7Z7B8 93 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 ATG4DQ86TL0 474 aaPredicted RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 ADSSL1Q8N142 457 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 SLC43A3Q8NBI5 491 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 RNF214Q8ND24 703 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 NKD2Q969F2 451 aaPredicted RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 PABPC5Q96DU9 382 aaKnown RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 HEXIM2Q96MH2 286 aaKnown RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 PCGF6Q9BYE7 350 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 FTOQ9C0B1 505 aaKnown RBP eCLIP7.13□□□□□ -1.27
NCL-208ENST00000466274 TANGO6Q9C0B7 1094 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 UPF3AQ9H1J1 476 aaKnown RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 BICC1Q9H694 974 aaKnown RBP7.13□□□□□ -1.27
NCL-208ENST00000466274 CBX8Q9HC52 389 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 CACNA1GO43497 2377 aa7.13□□□□□ -1.27
NCL-208ENST00000466274 TNKSO95271 1327 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 UMODL1Q5DID0 1318 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 PNMA6FA0A0J9YX94 578 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 MED19A0JLT2 244 aaPredicted RBP7.12□□□□□ -1.27
NCL-208ENST00000466274 F6X3S4 739 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 H0Y858 1186 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 CEACAM5P06731 702 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 NME2P22392 152 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 AVPR2P30518 371 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 NBL1P41271 181 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 ERVK-21P61565 698 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 PLCB3Q01970 1234 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 DSC3Q14574 896 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 RALBP1Q15311 655 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 SLC4A10Q6U841 1118 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 FAM214BQ7L5A3 538 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 LRRN4CLQ8ND94 238 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 GRIN3AQ8TCU5 1115 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 MRPL38Q96DV4 380 aaKnown RBP7.12□□□□□ -1.27
NCL-208ENST00000466274 SCLYQ96I15 445 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 HRASLS5Q96KN8 279 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 EMILIN2Q9BXX0 1053 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 WNT8AQ9H1J5 351 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 MKNK2Q9HBH9 465 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 TLR9Q9NR96 1032 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 PLXNA1Q9UIW2 1896 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 ARID1BQ8NFD5 2236 aaPredicted RBP7.12□□□□□ -1.27
NCL-208ENST00000466274 C5orf42Q9H799 3197 aa7.12□□□□□ -1.27
NCL-208ENST00000466274 AK9Q5TCS8 1911 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 PRRC2BQ5JSZ5 2229 aaKnown RBP7.11□□□□□ -1.27
NCL-208ENST00000466274 MYADML2A6NDP7 307 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 STXBP3O00186 592 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 PGK2P07205 417 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 PHKA1P46020 1223 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 ZXDAP98168 799 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 SIGLEC14Q08ET2 396 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 ACVR2BQ13705 512 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 PUM1Q14671 1186 aaKnown RBP eCLIP7.11□□□□□ -1.272e-20■■□□□ 13
NCL-208ENST00000466274 SMAD2Q15796 467 aaKnown RBP7.11□□□□□ -1.27
NCL-208ENST00000466274 ZNF124Q15973 351 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 ABCB5Q2M3G0 1257 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 CERKLQ49MI3 558 aaPredicted RBP7.11□□□□□ -1.27
NCL-208ENST00000466274 PPM1JQ5JR12 505 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 NOL8Q76FK4 1167 aaKnown RBP7.11□□□□□ -1.27
NCL-208ENST00000466274 UBE3DQ7Z6J8 389 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 KLHDC4Q8TBB5 520 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 KAZALD1Q96I82 304 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 RAD9AQ99638 391 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 TRPV6Q9H1D0 765 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 ABHD16BQ9H3Z7 469 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 DNAJC18Q9H819 358 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 RAI14Q9P0K7 980 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 DCTN4Q9UJW0 460 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 MTUS1Q9ULD2 1270 aa7.11□□□□□ -1.27
NCL-208ENST00000466274 PTPRZ1P23471 2315 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms