RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 FGFR4P22455 802 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 U2AF2P26368 475 aaKnown RBP eCLIP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 YWHABP31946 246 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 DEKP35659 375 aaKnown RBP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 TOB1P50616 345 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 POLGP54098 1239 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 CUL4AQ13619 759 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 RHPN2Q8IUC4 686 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 HSCBQ8IWL3 235 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 NME8Q8N427 588 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 PHOSPHO2Q8TCD6 241 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 PIGOQ8TEQ8 1089 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 NLRP7Q8WX94 980 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 NLRP4Q96MN2 994 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 MTMR9Q96QG7 549 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 ZSWIM4Q9H7M6 989 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 CYP26B1Q9NR63 512 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 PADI3Q9ULW8 664 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 FNDC1Q4ZHG4 1894 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 TTC3P53804 2025 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 TMEM265A0A087WTH1 108 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 RFXAPO00287 272 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 CSDE1O75534 798 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 SLITRK3O94933 977 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 GJB5O95377 273 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 HSP90AA1P07900 732 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 FOSL2P15408 326 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 IGFBP4P22692 258 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 TRAPPC10P48553 1259 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 GPC3P51654 580 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 PTGDRQ13258 359 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 TARBP2Q15633 366 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 MAEAQ7L5Y9 396 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 FAM228AQ86W67 206 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 KSR1Q8IVT5 923 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 C4orf19Q8IY42 314 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 MICALL1Q8N3F8 863 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 LINC01465Q8N7H1 131 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 LINC01599Q8WXQ3 324 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 PPM1EQ8WY54 764 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 ARNTL2Q8WYA1 636 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 TMEM143Q96AN5 459 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 YME1L1Q96TA2 773 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 CDH23Q9H251 3354 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 ATG2AQ2TAZ0 1938 aa10.88□□□□□ -0.67
RTFDC1-205ENST00000466260 KDM3AQ9Y4C1 1321 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 LAMA2P24043 3122 aaKnown RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 A0A087WZ62 844 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 USO1O60763 962 aaKnown RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 GPR32O75388 356 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 MED24O75448 989 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 CSPG5O95196 566 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 DNM2P50570 870 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 CRYBB1P53674 252 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 ORC2Q13416 577 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 EMC2Q15006 297 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 ZRSR1Q15695 479 aaKnown RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 PAN2Q504Q3 1202 aaKnown RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 POTEGQ6S5H5 508 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 OTUD6AQ7L8S5 288 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 USP38Q8NB14 1042 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 NEK9Q8TD19 979 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 SLC7A3Q8WY07 619 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 GAS2L1Q99501 681 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 MTRQ99707 1265 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 FDXACB1Q9BRP7 624 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 ERVK-5Q9HDB9 667 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 SUCLA2Q9P2R7 463 aaPredicted RBP10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 ST3GAL5Q9UNP4 418 aa10.87□□□□□ -0.67
RTFDC1-205ENST00000466260 DENND3A2RUS2 1198 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 PP2D1A8MPX8 630 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 ENPP3O14638 875 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 MGEA5O60502 916 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 MAFO75444 373 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 PTMSP20962 102 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 CCT6AP40227 531 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 GATMP50440 423 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 TAP1Q03518 808 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 RILPL1Q5EBL4 403 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 RTN4RL1Q86UN2 441 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 CATSPER3Q86XQ3 398 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 ERMNQ8TAM6 284 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 SNX29Q8TEQ0 813 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 TOP1MTQ969P6 601 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 CEP89Q96ST8 783 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 RAD9AQ99638 391 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 ADAM2Q99965 735 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 TMX1Q9H3N1 280 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 LRWD1Q9UFC0 647 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 LRFN2Q9ULH4 789 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 STXBP5LQ9Y2K9 1186 aa10.86□□□□□ -0.67
RTFDC1-205ENST00000466260 PLXNA4Q9HCM2 1894 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 LINC01553A4QN01 128 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 EPOPA6NHQ4 379 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 GPR182O15218 404 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 SRGAP2CP0DJJ0 459 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms