RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 IGSF22Q8N9C0 903 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 PIGOQ8TEQ8 1089 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 NLRP7Q8WX94 980 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 MTRQ99707 1265 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 POLR3CQ9BUI4 534 aaPredicted RBP14.4□□□□□ -0.1
COL5A1-206ENST00000465877 RAB34Q9BZG1 259 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 ADAMTS10Q9H324 1103 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 TMX1Q9H3N1 280 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 ANKEF1Q9NU02 776 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 LRWD1Q9UFC0 647 aa14.4□□□□□ -0.1
COL5A1-206ENST00000465877 SPTBN5Q9NRC6 3674 aaKnown RBP14.4□□□□□ -0.1
COL5A1-206ENST00000465877 UPP2O95045 317 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 EIF4BP23588 611 aaKnown RBP14.39□□□□□ -0.11
COL5A1-206ENST00000465877 RPA1P27694 616 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 RARRES1P49788 294 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 HTRA4P83105 476 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-206ENST00000465877 TAP1Q03518 808 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 RESTQ13127 1097 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 GRIN2CQ14957 1233 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 ODR4Q5SWX8 454 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 ZNF410Q86VK4 478 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 EXOC8Q8IYI6 725 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 SNX29Q8TEQ0 813 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 PSPC1Q8WXF1 523 aaKnown RBP14.39□□□□□ -0.11
COL5A1-206ENST00000465877 MYLIPQ8WY64 445 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 TOP1MTQ969P6 601 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 NLRP4Q96MN2 994 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 CDX2Q99626 313 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-206ENST00000465877 RAD9AQ99638 391 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 TSPYL2Q9H2G4 693 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-206ENST00000465877 ATP6V0A4Q9HBG4 840 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 XPNPEP1Q9NQW7 623 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 SUCLA2Q9P2R7 463 aaPredicted RBP14.39□□□□□ -0.11
COL5A1-206ENST00000465877 ST3GAL5Q9UNP4 418 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 COL4A3BPQ9Y5P4 624 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 PLXNA4Q9HCM2 1894 aa14.39□□□□□ -0.11
COL5A1-206ENST00000465877 XIRP2A4UGR9 3374 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 PP2D1A8MPX8 630 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 GPR182O15218 404 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 MGEA5O60502 916 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 USO1O60763 962 aaKnown RBP14.38□□□□□ -0.11
COL5A1-206ENST00000465877 DGAT1O75907 488 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 DARSP14868 501 aaKnown RBP14.38□□□□□ -0.11
COL5A1-206ENST00000465877 CCT6AP40227 531 aaKnown RBP14.38□□□□□ -0.11
COL5A1-206ENST00000465877 IL17AQ16552 155 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 DTHD1Q6ZMT9 781 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 SPRED2Q7Z698 418 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 KSR1Q8IVT5 923 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 SP7Q8TDD2 431 aaPredicted RBP14.38□□□□□ -0.11
COL5A1-206ENST00000465877 TCP11Q8WWU5 503 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 TMEM143Q96AN5 459 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 YME1L1Q96TA2 773 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 RC3H2Q9HBD1 1191 aaKnown RBP14.38□□□□□ -0.11
COL5A1-206ENST00000465877 MTMR6Q9Y217 621 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 STXBP5LQ9Y2K9 1186 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 INSL6Q9Y581 213 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 ADGRA3Q8IWK6 1321 aa14.38□□□□□ -0.11
COL5A1-206ENST00000465877 A0A087WZ62 844 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 DENND3A2RUS2 1198 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 ENPP3O14638 875 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 STX6O43752 255 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 HSP90AA1P07900 732 aaKnown RBP14.37□□□□□ -0.11
COL5A1-206ENST00000465877 FOSL2P15408 326 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 MUTP22033 750 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 CDC42EP1Q00587 391 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 PDIA5Q14554 519 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 FDXACB1Q9BRP7 624 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-206ENST00000465877 GCOM2Q9BZD3 368 aaPredicted RBP14.37□□□□□ -0.11
COL5A1-206ENST00000465877 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 DBR1Q9UK59 544 aaKnown RBP14.37□□□□□ -0.11
COL5A1-206ENST00000465877 STK24Q9Y6E0 443 aa14.37□□□□□ -0.11
COL5A1-206ENST00000465877 A0A087WWV3 80 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 LINC01553A4QN01 128 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 VWA3AA6NCI4 1184 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 BMP15O95972 392 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 FGFR4P22455 802 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 SFPQP23246 707 aaKnown RBP eCLIP14.36□□□□□ -0.11
COL5A1-206ENST00000465877 SARSP49591 514 aaKnown RBP14.36□□□□□ -0.11
COL5A1-206ENST00000465877 ECM1Q16610 540 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 ARL6IP4Q66PJ3 421 aaKnown RBP14.36□□□□□ -0.11
COL5A1-206ENST00000465877 FAM43BQ6ZT52 329 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-206ENST00000465877 RTN4RL1Q86UN2 441 aaPredicted RBP14.36□□□□□ -0.11
COL5A1-206ENST00000465877 NPAS4Q8IUM7 802 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 PRPF31Q8WWY3 499 aaKnown RBP14.36□□□□□ -0.11
COL5A1-206ENST00000465877 NACC1Q96RE7 527 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 ADAM2Q99965 735 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 CERS4Q9HA82 394 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 IFT122Q9HBG6 1241 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 C1orf112Q9NSG2 853 aa14.36□□□□□ -0.11
COL5A1-206ENST00000465877 TDRD15B5MCY1 1934 aaKnown RBP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 ARHGEF35A5YM69 484 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 CSDE1O75534 798 aaKnown RBP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 XRCC6P12956 609 aaKnown RBP eCLIP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 IBSPP21815 317 aaPredicted RBP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 LAMTOR4Q0VGL1 99 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 DSC3Q14574 896 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 SF3A1Q15459 793 aaKnown RBP14.35□□□□□ -0.11
COL5A1-206ENST00000465877 KRT79Q5XKE5 535 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 ARNTL2Q8WYA1 636 aa14.35□□□□□ -0.11
COL5A1-206ENST00000465877 GAS2L1Q99501 681 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms