RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 HTTP42858 3142 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 DDX60LQ5H9U9 1706 aaKnown RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 CENPFP49454 3210 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 MROH7-TTC4A0A0A0MT08 1334 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 TMEM82A0PJX8 343 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 DDTLA6NHG4 134 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 KRTAP9-7A8MTY7 169 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 MYO1BO43795 1136 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 WDHD1O75717 1129 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 HSPA8P11142 646 aaKnown RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 MAP2K2P36507 400 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 BTDP43251 543 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 LBX1P52954 281 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 RHBDL3P58872 404 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 LINC00310P59036 64 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 DYNLL1P63167 89 aaKnown RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 FKBP1BP68106 108 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 TTC39AQ5SRH9 613 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 TSHZ3Q63HK5 1081 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 NLRC3Q7RTR2 1065 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 ZNF655Q8N720 491 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 OTUD7AQ8TE49 926 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 ZNF512BQ96KM6 892 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 ZNF552Q9H707 407 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 USP40Q9NVE5 1235 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 TCFL5Q9UL49 500 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 DOCK1Q14185 1865 aa5.85□□□□□ -1.47
EXOSC3-204ENST00000465860 NAV1Q8NEY1 1877 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 MAST3O60307 1309 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 GPR75-ASB3A0A0A6YYF3 556 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 PEX10O60683 326 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 PRAMEF1O95521 474 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 UQCRFS1P1P0C7P4 283 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 ECE1P42892 770 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 RGS3P49796 1198 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 IRX6P78412 446 aaPredicted RBP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 APOBRQ0VD83 1088 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 NOGQ13253 232 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 PICALMQ13492 652 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 VGLL4Q14135 290 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 BBS9Q3SYG4 887 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 CCDC158Q5M9N0 1113 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 ZPBP2Q6X784 338 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 NLRX1Q86UT6 975 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 DZIP1Q86YF9 867 aaKnown RBP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 REXO1Q8N1G1 1221 aaKnown RBP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 EXOC6Q8TAG9 804 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 SH3RF3Q8TEJ3 882 aaPredicted RBP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 FAM151AQ8WW52 585 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 ZKSCAN4Q969J2 545 aaPredicted RBP5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 PTPN18Q99952 460 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 PRDM14Q9GZV8 571 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 DCTPP1Q9H773 170 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 RNF186Q9NXI6 227 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 RAI14Q9P0K7 980 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 ZMYM5Q9UJ78 669 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 PPP2R3BQ9Y5P8 575 aa5.84□□□□□ -1.47
EXOSC3-204ENST00000465860 RPAP1Q9BWH6 1393 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 SMIM22K7EJ46 135 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 NUAK1O60285 661 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 CLEC3AO75596 197 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 IGHDP01880 384 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 SYPP08247 313 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 MCM4P33991 863 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 NF2P35240 595 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 KIR2DL1P43626 348 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 KIR2DL2P43627 348 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 PCBP3P57721 371 aaKnown RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 DLG4P78352 724 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 CAP1Q01518 475 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 MAP2K1Q02750 393 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 RAD51AP2Q09MP3 1159 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 TNFAIP1Q13829 316 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 RRP1BQ14684 758 aaKnown RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 SHROOM1Q2M3G4 852 aaPredicted RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 SLC4A8Q2Y0W8 1093 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 SUPT20HL1Q3ZLR7 823 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 FKBP1CQ5VVH2 108 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 ARMC9Q7Z3E5 817 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 FAM83AQ86UY5 434 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 ERC1Q8IUD2 1116 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 TMEM192Q8IY95 271 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 ZGPATQ8N5A5 531 aaKnown RBP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 MIGA1Q8NAN2 632 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 KIF1BPQ96EK5 621 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 WNK4Q96J92 1243 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 MAP6Q96JE9 813 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 IDI2Q9BXS1 227 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 BOLA2Q9H3K6 86 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 GCM1Q9NP62 436 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 AATFQ9NY61 560 aaKnown RBP eCLIP5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 LRP2BPQ9P2M1 347 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 BRCA2P51587 3418 aa5.83□□□□□ -1.48
EXOSC3-204ENST00000465860 MYH8P13535 1937 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms