RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PCDHGC5Q9Y5F6 944 aa15.48■□□□□ 0.07
HDAC6-215ENST00000465457 KAT6AQ92794 2004 aa15.48■□□□□ 0.07
HDAC6-215ENST00000465457 GLP2RO95838 553 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 HOXC8P31273 242 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 MCM7P33993 719 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 BMPR1AP36894 532 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 NDUFV1P49821 464 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 RBM10P98175 930 aaKnown RBP15.47■□□□□ 0.07
HDAC6-215ENST00000465457 ADAM15Q13444 863 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 STXBP2Q15833 593 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 FIBCD1Q8N539 461 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 SMRP1Q8NCR6 262 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 ATP6V0A1Q93050 837 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 ZFP91Q96JP5 570 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-215ENST00000465457 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 C11orf84Q9BUA3 381 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-215ENST00000465457 AMNQ9BXJ7 453 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 BCAS3Q9H6U6 928 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 TUBE1Q9UJT0 475 aa15.47■□□□□ 0.07
HDAC6-215ENST00000465457 BARX2Q9UMQ3 279 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-215ENST00000465457 DMXL1Q9Y485 3027 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 B4DLN1 442 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 NCK2O43639 380 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 EYA4O95677 639 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 SMIM10L2AP0DMW4 78 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 SMIM10L2BP0DMW5 78 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 GCFC2P16383 781 aaKnown RBP15.46■□□□□ 0.07
HDAC6-215ENST00000465457 CDC37Q16543 378 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-215ENST00000465457 INF2Q27J81 1249 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 DTHD1Q6ZMT9 781 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 TRIML1Q8N9V2 468 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 IL31RAQ8NI17 732 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 NSUN6Q8TEA1 469 aaKnown RBP15.46■□□□□ 0.07
HDAC6-215ENST00000465457 AK8Q96MA6 479 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 MYO10Q9HD67 2058 aa15.46■□□□□ 0.07
HDAC6-215ENST00000465457 DNAH14Q0VDD8 3507 aa15.46■□□□□ 0.06
HDAC6-215ENST00000465457 WDR87Q6ZQQ6 2873 aa15.46■□□□□ 0.06
HDAC6-215ENST00000465457 C17orf102A2RUQ5 167 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 GOLGA6L19H0YKK7 550 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 NEMFO60524 1076 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 SMC2O95347 1197 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 AVPR2P30518 371 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 NLRP12P59046 1061 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 SP2Q02086 613 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 SIGLEC14Q08ET2 396 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 AP3B2Q13367 1082 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 LAMC2Q13753 1193 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 CBX2Q14781 532 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-215ENST00000465457 QRICH1Q2TAL8 776 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 IQUBQ8NA54 791 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 PRRX2Q99811 253 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 DNAJC25Q9H1X3 360 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 CBX8Q9HC52 389 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 PXMP2Q9NR77 195 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 USP15Q9Y4E8 981 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-215ENST00000465457 TELO2Q9Y4R8 837 aa15.45■□□□□ 0.06
HDAC6-215ENST00000465457 CACNA1BQ00975 2339 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 VWA3AA6NCI4 1184 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 OPLAHO14841 1288 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 POLR2DO15514 142 aaKnown RBP15.44■□□□□ 0.06
HDAC6-215ENST00000465457 GGPS1O95749 300 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 NR3C2P08235 984 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 OR52Z1P0C646 297 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 SLFN14P0C7P3 912 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 UBA1P22314 1058 aaKnown RBP15.44■□□□□ 0.06
HDAC6-215ENST00000465457 CLK2P49760 499 aaKnown RBP15.44■□□□□ 0.06
HDAC6-215ENST00000465457 TPM4P67936 248 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 FOXK2Q01167 660 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 SEMA3FQ13275 785 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 POSTNQ15063 836 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 LONRF3Q496Y0 759 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 ARHGEF16Q5VV41 709 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 TRIM50Q86XT4 487 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 C4orf32Q8N8J7 132 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 RASGRP4Q8TDF6 673 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 CLP1Q92989 425 aaKnown RBP15.44■□□□□ 0.06
HDAC6-215ENST00000465457 RPGRIP1Q96KN7 1286 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 SPATA33Q96N06 139 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 RNPEPQ9H4A4 650 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 PSTPIP2Q9H939 334 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 DACH1Q9UI36 760 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 PNMA2Q9UL42 364 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 PCDHA1Q9Y5I3 950 aa15.44■□□□□ 0.06
HDAC6-215ENST00000465457 BAZ2BQ9UIF8 2168 aaKnown RBP15.43■□□□□ 0.06
HDAC6-215ENST00000465457 BECN2A8MW95 431 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 FOSP01100 380 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-215ENST00000465457 RB1P06400 928 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 GRIN1Q05586 938 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 CT47A1Q5JQC4 288 aaPredicted RBP15.43■□□□□ 0.06
HDAC6-215ENST00000465457 CELF3Q5SZQ8 465 aaKnown RBP15.43■□□□□ 0.06
HDAC6-215ENST00000465457 NT5DC1Q5TFE4 455 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 PPP4R3AQ6IN85 833 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 RBM23Q86U06 439 aaKnown RBP15.43■□□□□ 0.06
HDAC6-215ENST00000465457 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 IWS1Q96ST2 819 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 RAB34Q9BZG1 259 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 CUEDC2Q9H467 287 aa15.43■□□□□ 0.06
HDAC6-215ENST00000465457 CCDC39Q9UFE4 941 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms