RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 CDHR1Q96JP9 859 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 VN1R3Q9BXE9 311 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 JADE2Q9NQC1 790 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 NCDNQ9UBB6 729 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 WNT16Q9UBV4 365 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 ZBTB42B2RXF5 422 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 PIK3CDO00329 1044 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 GPR32O75388 356 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
HDAC6-214ENST00000465269 FGFR4P22455 802 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 GBP2P32456 591 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-214ENST00000465269 CRYBB1P53674 252 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-214ENST00000465269 ITGB3BPQ13352 177 aaPredicted RBP17.1■□□□□ 0.33
HDAC6-214ENST00000465269 IMMTQ16891 758 aaKnown RBP17.1■□□□□ 0.33
HDAC6-214ENST00000465269 LETM2Q2VYF4 491 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 VARS2Q5ST30 1063 aaKnown RBP17.1■□□□□ 0.33
HDAC6-214ENST00000465269 PLPPR4Q7Z2D5 763 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 SLC44A3Q8N4M1 653 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 MYADMQ96S97 322 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 SFXN1Q9H9B4 322 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 SIT1Q9Y3P8 196 aa17.1■□□□□ 0.33
HDAC6-214ENST00000465269 ASPMQ8IZT6 3477 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 hCG_1642624A0A1W2PR95 340 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
HDAC6-214ENST00000465269 ZC3H11AO75152 810 aaKnown RBP eCLIP17.09■□□□□ 0.33
HDAC6-214ENST00000465269 TROAPQ12815 778 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 COL9A2Q14055 689 aaPredicted RBP17.09■□□□□ 0.33
HDAC6-214ENST00000465269 KIAA0319Q5VV43 1072 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 CHAMP1Q96JM3 812 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 MYL10Q9BUA6 226 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 KCNH7Q9NS40 1196 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 IGSF9Q9P2J2 1179 aa17.09■□□□□ 0.33
HDAC6-214ENST00000465269 HOXA2O43364 376 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 KINO60870 393 aaKnown RBP17.08■□□□□ 0.32
HDAC6-214ENST00000465269 CCNE2O96020 404 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 CTSAP10619 480 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.32
HDAC6-214ENST00000465269 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
HDAC6-214ENST00000465269 WTAPQ15007 396 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
HDAC6-214ENST00000465269 METTL13Q8N6R0 699 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 PGBD1Q96JS3 809 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 IL25Q9H293 177 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 CNNM2Q9H8M5 875 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 CDV3Q9UKY7 258 aaKnown RBP17.08■□□□□ 0.32
HDAC6-214ENST00000465269 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 PKD1L2Q7Z442 2459 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 CNOT1A5YKK6 2376 aaKnown RBP17.08■□□□□ 0.32
HDAC6-214ENST00000465269 SPEGQ15772 3267 aa17.08■□□□□ 0.32
HDAC6-214ENST00000465269 BACH1O14867 736 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 IFIT3O14879 490 aaKnown RBP17.07■□□□□ 0.32
HDAC6-214ENST00000465269 B4GALT3O60512 393 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 C22orf31O95567 290 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 ATP4AP20648 1035 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 CLCN3P51790 818 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 PTPN14Q15678 1187 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 ODR4Q5SWX8 454 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 ZNF598Q86UK7 904 aaKnown RBP17.07■□□□□ 0.32
HDAC6-214ENST00000465269 CCDC60Q8IWA6 550 aaPredicted RBP17.07■□□□□ 0.32
HDAC6-214ENST00000465269 LPPQ93052 612 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 PSTPIP2Q9H939 334 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 ARHGEF3Q9NR81 526 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 DOCK8Q8NF50 2099 aa17.07■□□□□ 0.32
HDAC6-214ENST00000465269 HBP1O60381 514 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 CSDE1O75534 798 aaKnown RBP17.06■□□□□ 0.32
HDAC6-214ENST00000465269 ADRB1P08588 477 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
HDAC6-214ENST00000465269 SRFP11831 508 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 HOXB3P14651 431 aaPredicted RBP17.06■□□□□ 0.32
HDAC6-214ENST00000465269 KLRC2P26717 231 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 NT5C2P49902 561 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 CLCN4P51793 760 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 TNPO1Q92973 898 aaKnown RBP17.06■□□□□ 0.32
HDAC6-214ENST00000465269 IGSF21Q96ID5 467 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 SDF4Q9BRK5 362 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 GBP3Q9H0R5 595 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 PARD6AQ9NPB6 346 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 DNAJB4Q9UDY4 337 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 USP18Q9UMW8 372 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 PCDHA6Q9UN73 950 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 PCDHA8Q9Y5H6 950 aa17.06■□□□□ 0.32
HDAC6-214ENST00000465269 MEIS3P2A8K0S8 358 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 RFPL2O75678 378 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 PLEKHA8P1O95397 391 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 ZSCAN20P17040 1043 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 NLRP11P59045 1033 aaKnown RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 COL9A3Q14050 684 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 BMS1Q14692 1282 aaKnown RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 DCLRE1AQ6PJP8 1040 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 DDX53Q86TM3 631 aaKnown RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 PJA1Q8NG27 643 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 MXRA8Q9BRK3 442 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 ZBTB47Q9UFB7 747 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 MTF2Q9Y483 593 aaPredicted RBP17.05■□□□□ 0.32
HDAC6-214ENST00000465269 IRAK3Q9Y616 596 aa17.05■□□□□ 0.32
HDAC6-214ENST00000465269 IGKV6D-21A0A0A0MT36 114 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 ATG7O95352 703 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms