RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 PTPN21Q16825 1174 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 KCNT2Q6UVM3 1135 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 REXO1Q8N1G1 1221 aaKnown RBP12.39□□□□□ -0.43
COL11A1-207ENST00000465209 LRRC43Q8N309 656 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 LRRC71Q8N4P6 559 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 METTL13Q8N6R0 699 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 MICAL1Q8TDZ2 1067 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 CEP89Q96ST8 783 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 AGXT2Q9BYV1 514 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 CEP131Q9UPN4 1083 aa12.39□□□□□ -0.43
COL11A1-207ENST00000465209 C2orf16Q68DN1 1984 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 MAGEB2O15479 319 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 HOXA2O43364 376 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
COL11A1-207ENST00000465209 OATP04181 439 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 TECP42680 631 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL11A1-207ENST00000465209 PRKCEQ02156 737 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 TARBP2Q15633 366 aaKnown RBP12.38□□□□□ -0.43
COL11A1-207ENST00000465209 PRR16Q569H4 304 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 EFCAB12Q6NXP0 572 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 SLC39A11Q8N1S5 342 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 FAM167AQ96KS9 214 aa12.38□□□□□ -0.43
COL11A1-207ENST00000465209 NGRNQ9NPE2 291 aaKnown RBP12.38□□□□□ -0.43
COL11A1-207ENST00000465209 A0A0U1RQF3 1178 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 C2orf71A6NGG8 1288 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 MSH4O15457 936 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 STBD1O95210 358 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 PDGFBP01127 241 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-207ENST00000465209 DARSP14868 501 aaKnown RBP12.37□□□□□ -0.43
COL11A1-207ENST00000465209 HOXB8P17481 243 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-207ENST00000465209 PPM1AP35813 382 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 DRP2Q13474 957 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 KRT32Q14532 448 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 MCTP2Q6DN12 878 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 LLGL2Q6P1M3 1020 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 TRMT1LQ7Z2T5 733 aaKnown RBP12.37□□□□□ -0.43
COL11A1-207ENST00000465209 TMEM173Q86WV6 379 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-207ENST00000465209 ZNF710Q8N1W2 664 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 PHKBQ93100 1093 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
COL11A1-207ENST00000465209 ZNF558Q96NG5 402 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 PRRX2Q99811 253 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 APOL5Q9BWW9 433 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 POMKQ9H5K3 350 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 C6orf50Q9HD87 102 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 ENTPD7Q9NQZ7 604 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 AKT3Q9Y243 479 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 HCFC2Q9Y5Z7 792 aa12.37□□□□□ -0.43
COL11A1-207ENST00000465209 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 IGKV6-21A0A0C4DH24 114 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 HMGB1P09429 215 aaKnown RBP12.36□□□□□ -0.43
COL11A1-207ENST00000465209 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 FGFR4P22455 802 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 Q6ZUG5 572 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 SUGP1Q8IWZ8 645 aaKnown RBP12.36□□□□□ -0.43
COL11A1-207ENST00000465209 MRPL43Q8N983 215 aaKnown RBP12.36□□□□□ -0.43
COL11A1-207ENST00000465209 FEZF2Q8TBJ5 459 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 HELQQ8TDG4 1101 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 BRF1Q92994 677 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 GJA10Q969M2 543 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 MAP7D2Q96T17 732 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 TRAIPQ9BWF2 469 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 UNC45AQ9H3U1 944 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 DISC1Q9NRI5 854 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 ARID2Q68CP9 1835 aa12.36□□□□□ -0.43
COL11A1-207ENST00000465209 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 C2CD4DB7Z1M9 353 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 M0R2N6 131 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 CLASP2O75122 1294 aaKnown RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 CSDE1O75534 798 aaKnown RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 PSMD10O75832 226 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 EOMESO95936 686 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 ZSCAN20P17040 1043 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 TMOD1P28289 359 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 GNA11P29992 359 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 AVPR2P30518 371 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 SMC1AQ14683 1233 aaKnown RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 BCL7CQ8WUZ0 217 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 CASP10Q92851 521 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 RIT2Q99578 217 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 RNF26Q9BY78 433 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 ZBP1Q9H171 429 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 ADAM7Q9H2U9 754 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 PUF60Q9UHX1 559 aaKnown RBP12.35□□□□□ -0.43
COL11A1-207ENST00000465209 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 IRAK3Q9Y616 596 aa12.35□□□□□ -0.43
COL11A1-207ENST00000465209 ZFHX2Q9C0A1 2572 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-207ENST00000465209 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 MEIS3P2A8K0S8 358 aa12.34□□□□□ -0.43
COL11A1-207ENST00000465209 B4GALT3O60512 393 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms