RNA–Protein interactions for RNA: ENST00000465030.1

SNX12-203, Transcript of sorting nexin 12, humanhuman

TSL 2

Gene SNX12, Length 946 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-203ENST00000465030 ANHXE9PGG2 379 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 INSRRP14616 1297 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNX12-203ENST00000465030 CLCN4P51793 760 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 LIMK1P53667 647 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 HTR4Q13639 388 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 WTAPQ15007 396 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 SAMD3Q8N6K7 520 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 CMASQ8NFW8 434 aaPredicted RBP17.76■□□□□ 0.43
SNX12-203ENST00000465030 TMEM40Q8WWA1 233 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 BBXQ8WY36 941 aaPredicted RBP17.76■□□□□ 0.43
SNX12-203ENST00000465030 MYL10Q9BUA6 226 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 AMNQ9BXJ7 453 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 JMJD4Q9H9V9 463 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 GINS2Q9Y248 185 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 COL4A3Q01955 1670 aa17.76■□□□□ 0.43
SNX12-203ENST00000465030 DHX16O60231 1041 aaKnown RBP17.75■□□□□ 0.43
SNX12-203ENST00000465030 POLGP54098 1239 aaPredicted RBP17.75■□□□□ 0.43
SNX12-203ENST00000465030 PRKCQQ04759 706 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 MLF2Q15773 248 aaPredicted RBP17.75■□□□□ 0.43
SNX12-203ENST00000465030 ODR4Q5SWX8 454 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 FCHSD1Q86WN1 690 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 NME8Q8N427 588 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 ECHDC1Q9NTX5 307 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 NUMBLQ9Y6R0 609 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 DOCK8Q8NF50 2099 aa17.75■□□□□ 0.43
SNX12-203ENST00000465030 GPR182O15218 404 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
SNX12-203ENST00000465030 BCAR1P56945 870 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 GPC5P78333 572 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 PRR23BQ6ZRT6 265 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 TMEM173Q86WV6 379 aaPredicted RBP17.74■□□□□ 0.43
SNX12-203ENST00000465030 CLDN23Q96B33 292 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 RHOBTB2Q9BYZ6 727 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 SMARCAD1Q9H4L7 1026 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 VAT1LQ9HCJ6 419 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 LTB4R2Q9NPC1 389 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 RTEL1Q9NZ71 1219 aa17.74■□□□□ 0.43
SNX12-203ENST00000465030 FRMPD4Q14CM0 1322 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 LAMA1P25391 3075 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 SMIM35A0A1B0GVV1 85 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 GSTTP1A0A1W2PQM5 241 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 HMMRO75330 724 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 TDGF1P13385 188 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 LAMP2P13473 410 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 CLLU1OSQ5K130 101 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 ZBTB41Q5SVQ8 909 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 CYP26C1Q6V0L0 522 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 GIMAP8Q8ND71 665 aaPredicted RBP17.73■□□□□ 0.43
SNX12-203ENST00000465030 TRAPPC12Q8WVT3 735 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 SEPT1Q8WYJ6 367 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 CDHR5Q9HBB8 845 aa17.73■□□□□ 0.43
SNX12-203ENST00000465030 LAMA4Q16363 1823 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 GCOM1H8Y6P7 765 aaPredicted RBP17.72■□□□□ 0.43
SNX12-203ENST00000465030 PPP1R11O60927 126 aaPredicted RBP17.72■□□□□ 0.43
SNX12-203ENST00000465030 KCNK5O95279 499 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 POLR2MP0CAP2 368 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 KLRC2P26717 231 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 RPS9P46781 194 aaKnown RBP17.72■□□□□ 0.43
SNX12-203ENST00000465030 NRLP54845 237 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 DSC3Q14574 896 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 ASPRV1Q53RT3 343 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 RSPO2Q6UXX9 243 aaPredicted RBP17.72■□□□□ 0.43
SNX12-203ENST00000465030 DDX53Q86TM3 631 aaKnown RBP17.72■□□□□ 0.43
SNX12-203ENST00000465030 ST13P5Q8NFI4 369 aaPredicted RBP17.72■□□□□ 0.43
SNX12-203ENST00000465030 EMILIN2Q9BXX0 1053 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 ADAM33Q9BZ11 813 aa17.72■□□□□ 0.43
SNX12-203ENST00000465030 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.72■□□□□ 0.433e-9■■■■■ 59.2
SNX12-203ENST00000465030 MYH6P13533 1939 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 CCDC195A0A1B0GUA6 201 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 CD72P21854 359 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 AASDHQ4L235 1098 aaPredicted RBP17.71■□□□□ 0.43
SNX12-203ENST00000465030 SLC44A4Q53GD3 710 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 SOWAHCQ53LP3 525 aaPredicted RBP17.71■□□□□ 0.43
SNX12-203ENST00000465030 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 FAM228AQ86W67 206 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 SIRT2Q8IXJ6 389 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 PNMA1Q8ND90 353 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 ZCCHC14Q8WYQ9 949 aaKnown RBP17.71■□□□□ 0.43
SNX12-203ENST00000465030 KLHL5Q96PQ7 755 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 MAN1C1Q9NR34 630 aa17.71■□□□□ 0.43
SNX12-203ENST00000465030 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
SNX12-203ENST00000465030 RBM25P49756 843 aaKnown RBP17.7■□□□□ 0.42
SNX12-203ENST00000465030 MTAPQ13126 283 aa17.7■□□□□ 0.42
SNX12-203ENST00000465030 PLCB4Q15147 1175 aa17.7■□□□□ 0.42
SNX12-203ENST00000465030 RPP25Q9BUL9 199 aaKnown RBP17.7■□□□□ 0.42
SNX12-203ENST00000465030 MRPL9Q9BYD2 267 aaKnown RBP17.7■□□□□ 0.42
SNX12-203ENST00000465030 INPPL1O15357 1258 aa17.69■□□□□ 0.42
SNX12-203ENST00000465030 CNPP09543 421 aaKnown RBP17.69■□□□□ 0.42
SNX12-203ENST00000465030 TARSP26639 723 aaKnown RBP17.69■□□□□ 0.42
SNX12-203ENST00000465030 SIM2Q14190 667 aaPredicted RBP17.69■□□□□ 0.42
SNX12-203ENST00000465030 VPS53Q5VIR6 699 aa17.69■□□□□ 0.42
SNX12-203ENST00000465030 TSHZ3Q63HK5 1081 aa17.69■□□□□ 0.42
SNX12-203ENST00000465030 MTHFD1LQ6UB35 978 aa17.69■□□□□ 0.42
SNX12-203ENST00000465030 GET4Q7L5D6 327 aaPredicted RBP17.69■□□□□ 0.42
SNX12-203ENST00000465030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.69■□□□□ 0.42
SNX12-203ENST00000465030 GATA6Q92908 595 aa17.69■□□□□ 0.42
SNX12-203ENST00000465030 TNPO1Q92973 898 aaKnown RBP17.69■□□□□ 0.42
SNX12-203ENST00000465030 IGSF21Q96ID5 467 aa17.69■□□□□ 0.42
SNX12-203ENST00000465030 WASF3Q9UPY6 502 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms