RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 MTG2Q9H4K7 406 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 SEC61A2Q9H9S3 476 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 CDC42EP3Q9UKI2 254 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 DUSP10Q9Y6W6 482 aa8.25□□□□□ -1.09
PTCD3-205ENST00000464541 A0A0G2JLL6 359 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-205ENST00000464541 ANKRD62A6NC57 917 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 LAMTOR5O43504 91 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 OPHN1O60890 802 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 PLATP00750 562 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 ZNF888P0CJ79 500 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-205ENST00000464541 EPHB4P54760 987 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 PPP2CBP62714 309 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 PPP2CAP67775 309 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 TMPRSS15P98073 1019 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 NFYCQ13952 458 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 CCDC178Q5BJE1 867 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 AGBL4Q5VU57 503 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 KLHDC10Q6PID8 442 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 ARHGEF18Q6ZSZ5 1173 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 GPR155Q7Z3F1 870 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 OR10A2Q9H208 303 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 SEMA4AQ9H3S1 761 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 POLR3BQ9NW08 1133 aaPredicted RBP8.24□□□□□ -1.09
PTCD3-205ENST00000464541 COL4A3BPQ9Y5P4 624 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 NUMBLQ9Y6R0 609 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 MYPNQ86TC9 1320 aa8.24□□□□□ -1.09
PTCD3-205ENST00000464541 PHLDB1Q86UU1 1377 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 LOC105371045A0A1W2PR82 267 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 BTBD11A6QL63 1104 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 K7ESF4 209 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 B4GALT4O60513 344 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 H2AFYO75367 372 aaKnown RBP8.23□□□□□ -1.09
PTCD3-205ENST00000464541 PFKMP08237 780 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 GPR15P49685 360 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 MANFP55145 182 aaKnown RBP8.23□□□□□ -1.09
PTCD3-205ENST00000464541 AMPD3Q01432 767 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 NFIXQ14938 502 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 PCOLCEQ15113 449 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 LARP4Q71RC2 724 aaKnown RBP eCLIP8.23□□□□□ -1.09
PTCD3-205ENST00000464541 CDYL2Q8N8U2 506 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 DYDC2Q96IM9 177 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 HIST1H2AHQ96KK5 128 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 HIST1H2AJQ99878 128 aa8.23□□□□□ -1.09
PTCD3-205ENST00000464541 FAM126AQ9BYI3 521 aaPredicted RBP8.23□□□□□ -1.09
PTCD3-205ENST00000464541 MRE11P49959 708 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 STAT5BP51692 787 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 MAN2A1Q16706 1144 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 ZBTB41Q5SVQ8 909 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 UNQ6494/PRO21346Q6UXR6 183 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 USP30Q70CQ3 517 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 NKD2Q969F2 451 aaPredicted RBP8.22□□□□□ -1.09
PTCD3-205ENST00000464541 NOL10Q9BSC4 688 aaKnown RBP8.22□□□□□ -1.09
PTCD3-205ENST00000464541 OSBPL6Q9BZF3 934 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 PUS7LQ9H0K6 701 aaKnown RBP8.22□□□□□ -1.09
PTCD3-205ENST00000464541 ADAM7Q9H2U9 754 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 MS4A5Q9H3V2 200 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 TOPORSQ9NS56 1045 aaPredicted RBP8.22□□□□□ -1.09
PTCD3-205ENST00000464541 CNOT11Q9UKZ1 510 aaKnown RBP8.22□□□□□ -1.09
PTCD3-205ENST00000464541 PPP2R3BQ9Y5P8 575 aa8.22□□□□□ -1.09
PTCD3-205ENST00000464541 CNOT4O95628 575 aaKnown RBP8.21□□□□□ -1.1
PTCD3-205ENST00000464541 NCLP19338 710 aaKnown RBP8.21□□□□□ -1.1
PTCD3-205ENST00000464541 CTSWP56202 376 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 FSCN1Q16658 493 aaKnown RBP8.21□□□□□ -1.1
PTCD3-205ENST00000464541 PTPROQ16827 1216 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 LHFPL2Q6ZUX7 228 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 C20orf173Q96LM9 149 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 WDR92Q96MX6 357 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 PCDH12Q9NPG4 1184 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 JADE2Q9NQC1 790 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 PTPN22Q9Y2R2 807 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 PCDHB6Q9Y5E3 794 aa8.21□□□□□ -1.1
PTCD3-205ENST00000464541 PRSS38A1L453 326 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 PMS2P1A4D2B8 440 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 ALG1L2C9J202 215 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 ARHGAP6O43182 974 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 PRICKLE3O43900 615 aaPredicted RBP8.2□□□□□ -1.1
PTCD3-205ENST00000464541 NRP2O60462 931 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 CDK11BP21127 795 aaKnown RBP8.2□□□□□ -1.1
PTCD3-205ENST00000464541 IBSPP21815 317 aaPredicted RBP8.2□□□□□ -1.1
PTCD3-205ENST00000464541 RRADP55042 308 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 ANTXR2P58335 489 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 TBC1D10BQ4KMP7 808 aaPredicted RBP8.2□□□□□ -1.1
PTCD3-205ENST00000464541 FERMT3Q86UX7 667 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 MENTQ9BUN1 341 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 KIAA1683Q9H0B3 1180 aa8.2□□□□□ -1.1
PTCD3-205ENST00000464541 CTDP1Q9Y5B0 961 aaPredicted RBP8.2□□□□□ -1.1
PTCD3-205ENST00000464541 LCHNA4D1U4 455 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 PCDH8O95206 1070 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 ENPP1P22413 925 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 RAC3P60763 192 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 PDCD1Q15116 288 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 PPP1R14CQ8TAE6 165 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 AHCYL2Q96HN2 611 aaKnown RBP8.19□□□□□ -1.1
PTCD3-205ENST00000464541 SLC5A4Q9NY91 659 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 NR2E1Q9Y466 385 aa8.19□□□□□ -1.1
PTCD3-205ENST00000464541 PRKD3O94806 890 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 FSBPO95073 299 aa8.18□□□□□ -1.1
PTCD3-205ENST00000464541 LMBR1Q8WVP7 490 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms