RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TMEM117Q9H0C3 514 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 TPCN1Q9ULQ1 816 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 KIAA1671Q9BY89 1806 aa16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
SNRNP40-203ENST00000463988 EIF5BO60841 1220 aaKnown RBP16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 GPR37L1O60883 481 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 DNM2P50570 870 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 PSMC5P62195 406 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 LETM2Q2VYF4 491 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 EFHBQ8N7U6 833 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 WASF1Q92558 559 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 KHSRPQ92945 711 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 KCNMB3Q9NPA1 279 aa16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
SNRNP40-203ENST00000463988 TBX3O15119 743 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 SLC37A4O43826 429 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 DKC1O60832 514 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 LAG3P18627 525 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 IBSPP21815 317 aaPredicted RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 SSTR3P32745 418 aaPredicted RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 ZP2Q05996 745 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 DLX2Q07687 328 aaPredicted RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 PPP2R5CQ13362 524 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 SMAD2Q15796 467 aaKnown RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 TMEM31Q5JXX7 168 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 SPOUT1Q5T280 376 aaKnown RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 PDE12Q6L8Q7 609 aaKnown RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 NEK8Q86SG6 692 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 ADHFE1Q8IWW8 467 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 COLGALT1Q8NBJ5 622 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 NLRP7Q8WX94 980 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 SCLT1Q96NL6 688 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 JPH2Q9BR39 696 aaPredicted RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 GCOM2Q9BZD3 368 aaPredicted RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 IGFLR1Q9H665 355 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 CWH43Q9H720 699 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 CHST12Q9NRB3 414 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 DACT1Q9NYF0 836 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 SEPT9Q9UHD8 586 aaPredicted RBP16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 LZTS1Q9Y250 596 aa16.14■□□□□ 0.17
SNRNP40-203ENST00000463988 A0A0U1RQF3 1178 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 FSD2A1L4K1 749 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 C19orf67A6NJJ6 358 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 DDX11L8A8MPP1 907 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 TBX10O75333 385 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 MAFO75444 373 aaPredicted RBP16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 FGF18O76093 207 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 CTDNEP1O95476 244 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 EOMESO95936 686 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 FGFR1P11362 822 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 GTF2F1P35269 517 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 IRS1P35568 1242 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 QARSP47897 775 aaKnown RBP16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 SMAD4Q13485 552 aaKnown RBP16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 MTERF2Q49AM1 385 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 ECHDC2Q86YB7 292 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 EXOC8Q8IYI6 725 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 RSPH1Q8WYR4 309 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 CASD1Q96PB1 797 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 LRFN3Q9BTN0 628 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 RNF19AQ9NV58 838 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 CD207Q9UJ71 328 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 VAV3Q9UKW4 847 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 PPME1Q9Y570 386 aa16.13■□□□□ 0.17
SNRNP40-203ENST00000463988 LINC01565O15544 149 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 MBTPS2O43462 519 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 EYA4O95677 639 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 P4HBP07237 508 aaKnown RBP16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 ALADP13716 330 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 AK2P54819 239 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 PLCB3Q01970 1234 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 DRP2Q13474 957 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 ANO5Q75V66 913 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 ADGRD2Q7Z7M1 963 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 ZNF598Q86UK7 904 aaKnown RBP16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 THNSL1Q8IYQ7 743 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 ABI1Q8IZP0 508 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 LRRC43Q8N309 656 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 MSLNLQ96KJ4 702 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 CDCA3Q99618 268 aaPredicted RBP16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 INO80BQ9C086 356 aaPredicted RBP16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 TLR9Q9NR96 1032 aa16.12■□□□□ 0.17
SNRNP40-203ENST00000463988 TMEM150BA6NC51 233 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 EML1O00423 815 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 FSCN2O14926 492 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 CCNT1O60563 726 aaKnown RBP16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 CSPG5O95196 566 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 PPM1AP35813 382 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 NRIP1P48552 1158 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 NDUFV1P49821 464 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 COASYQ13057 564 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 MICAL1Q8TDZ2 1067 aa16.11■□□□□ 0.17
SNRNP40-203ENST00000463988 HAS1Q92839 578 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms