RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CDHR2Q9BYE9 1310 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 CEMIPQ8WUJ3 1361 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 PRAMEF22A3QJZ6 481 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 ERVV-1B6SEH8 477 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 B8ZZF3 427 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 NOP56O00567 594 aaKnown RBP4.64□□□□□ -1.67
SCFD1-204ENST00000463622 FFAR3O14843 346 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 NTRK1P04629 796 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 THBDP07204 575 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 ASGR2P07307 311 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 CYP4F3Q08477 520 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 TEFQ10587 303 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 KRT24Q2M2I5 525 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 DLK2Q6UY11 383 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 DPF3Q92784 378 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 DPF2Q92785 391 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 COPS5Q92905 334 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 XYLT2Q9H1B5 865 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 MIS18AQ9NYP9 233 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 CNOT7Q9UIV1 285 aaKnown RBP4.64□□□□□ -1.67
SCFD1-204ENST00000463622 ATP6V0A2Q9Y487 856 aa4.64□□□□□ -1.67
SCFD1-204ENST00000463622 ZBED9Q6R2W3 1325 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 MAPK8IP3Q9UPT6 1336 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 PPIP5K2O43314 1243 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 DDAH1O94760 285 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 PMLP29590 882 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 PIP4K2AP48426 406 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 FXR1P51114 621 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 TNIP1Q15025 636 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 TARBP2Q15633 366 aaKnown RBP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 SF1Q15637 639 aaKnown RBP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 SV2CQ496J9 727 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 SLC10A5Q5PT55 438 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 CABP7Q86V35 215 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 TEX2Q8IWB9 1127 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 C2orf69Q8N8R5 385 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 BTN2A2Q8WVV5 523 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 TSR2Q969E8 191 aaKnown RBP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 NYXQ9GZU5 481 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 ADAM7Q9H2U9 754 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 GBA2Q9HCG7 927 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 ACTR10Q9NZ32 417 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 MARCH2Q9P0N8 246 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 FAN1Q9Y2M0 1017 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 CASP8AP2Q9UKL3 1982 aa4.63□□□□□ -1.67
SCFD1-204ENST00000463622 COL11A2P13942 1736 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-204ENST00000463622 H7C1D1 291 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 ARNTLO00327 626 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 BBOX1O75936 387 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SASH1O94885 1247 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 BUD31P41223 144 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 KIAA2012Q0VF49 1180 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 NCAPHQ15003 741 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 PRSS53Q2L4Q9 553 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SUSD4Q5VX71 490 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 VPS37DQ86XT2 251 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 TRIM59Q8IWR1 403 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 FAM178BQ8IXR5 827 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SP8Q8IXZ3 490 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 LINC01356Q8N9X3 169 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SUPT20HQ8NEM7 779 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 FNIP1Q8TF40 1166 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 FRS2Q8WU20 508 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 RPGRQ92834 1020 aaKnown RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 RELTQ969Z4 430 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 RBM17Q96I25 401 aaKnown RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 MRGPRX3Q96LB0 322 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.62□□□□□ -1.671e-9■□□□□ 11.2
SCFD1-204ENST00000463622 ZNF408Q9H9D4 720 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 TMEFF2Q9UIK5 374 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 ABCC12Q96J65 1359 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 MKI67P46013 3256 aaKnown RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 A0A0C4DFX4 3053 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SHTN1A0MZ66 631 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 YDJCA8MPS7 323 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 PRRG2O14669 202 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 NPHS1O60500 1241 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 RAD17O75943 681 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 ITGAVP06756 1048 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 ZNF853P0CG23 659 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 NCAM1P13591 858 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 TCF3P15923 654 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 ECI1P42126 302 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SLFN5Q08AF3 891 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 RIC1Q4ADV7 1423 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 WWC2Q6AWC2 1192 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 MRM1Q6IN84 353 aaKnown RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 FBXO46Q6PJ61 603 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-204ENST00000463622 POMZP3Q6PJE2 187 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 KRT26Q7Z3Y9 468 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 ZNF34Q8IZ26 560 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 PLEKHO2Q8TD55 490 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 NOX5Q96PH1 765 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 LRP2BPQ9P2M1 347 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 PMF1-BGLAPU3KQ54 211 aa4.62□□□□□ -1.67
SCFD1-204ENST00000463622 SIPA1L3O60292 1781 aaPredicted RBP4.61□□□□□ -1.67
SCFD1-204ENST00000463622 FANCIQ9NVI1 1328 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 SCN11AQ9UI33 1791 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 TM4SF4P48230 202 aa4.61□□□□□ -1.67
SCFD1-204ENST00000463622 VWA3BQ502W6 1294 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms