RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 PCDHA13Q9Y5I0 950 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 RGPD2P0DJD1 1756 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ABCB4P21439 1286 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 NBPF12Q5TAG4 269 aaPredicted RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 POTEAQ6S8J7 498 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ARFGEF2Q9Y6D5 1785 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 DAPK3O43293 454 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 STRNO43815 780 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ECM2O94769 699 aaPredicted RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 GABPAQ06546 454 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ALKBH5Q6P6C2 394 aaKnown RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 ABI1Q8IZP0 508 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 RNF34Q969K3 372 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 PLCB1Q9NQ66 1216 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 DBR1Q9UK59 544 aaKnown RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 IGSF9BQ9UPX0 1349 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 SSU72P8A0A1W2PR75 194 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 KCNK3O14649 394 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ZNF189O75820 626 aaPredicted RBP12.72□□□□□ -0.37
RBM39-223ENST00000463004 CIITAP33076 1130 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 ANKRD40Q6AI12 368 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 REEP2Q9BRK0 252 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
RBM39-223ENST00000463004 A0A1W2PRG0 241 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 RASSF7Q02833 373 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 FAM133AQ8N9E0 248 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 BEST2Q8NFU1 509 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 GBA2Q9HCG7 927 aaPredicted RBP12.71□□□□□ -0.37
RBM39-223ENST00000463004 ERAP1Q9NZ08 941 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 ZNF568Q3ZCX4 644 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 C4orf19Q8IY42 314 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 CCDC105Q8IYK2 499 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 CCHCR1Q8TD31 782 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 NSMCE1Q8WV22 266 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 ZNF653Q96CK0 615 aa12.71□□□□□ -0.37
RBM39-223ENST00000463004 MYBL1P10243 752 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 SARNPP82979 210 aaKnown RBP12.71□□□□□ -0.38
RBM39-223ENST00000463004 SYN2Q92777 582 aaPredicted RBP12.71□□□□□ -0.38
RBM39-223ENST00000463004 TXNDC16Q9P2K2 825 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 RGPD5Q99666 1765 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 GOLGA6CA6NDK9 693 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 GOLGA6BA6NDN3 693 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 KRIT1O00522 736 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 FOXN1O15353 648 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 ALDH1A1P00352 501 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 MYL3P08590 195 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 GOLGA6DP0CG33 693 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 INPP5BP32019 993 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 GPC3P51654 580 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 ZNF157P51786 506 aaPredicted RBP12.71□□□□□ -0.38
RBM39-223ENST00000463004 GRB10Q13322 594 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 CATSPER3Q86XQ3 398 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 TMEM35BQ8NCS4 154 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 TAAR1Q96RJ0 339 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 GOLGA6AQ9NYA3 693 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 ASIC3Q9UHC3 531 aa12.71□□□□□ -0.38
RBM39-223ENST00000463004 AGO2Q9UKV8 859 aaKnown RBP12.71□□□□□ -0.38
RBM39-223ENST00000463004 SFI1A8K8P3 1242 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 NT5DC1Q5TFE4 455 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 SLC35F6Q8N357 371 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 OR6J1Q8NGC5 347 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 SYTL5Q8TDW5 730 aaPredicted RBP12.7□□□□□ -0.38
RBM39-223ENST00000463004 PDCD2LQ9BRP1 358 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 ST7Q9NRC1 585 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 CASP1P29466 404 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 NR1I3Q14994 352 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 C7orf31Q8N865 590 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 FBXL13Q8NEE6 735 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 NUDT12Q9BQG2 462 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
RBM39-223ENST00000463004 USTQ9Y2C2 406 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 CYP3A7-CYP3A51PA0A087WV96 503 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 A0A087WWV3 80 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 CYP3A7P24462 503 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 MARK3P27448 753 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 HUNKP57058 714 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 PPIL2Q13356 520 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 DUOXA2Q1HG44 320 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 ZNF484Q5JVG2 852 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 LGSNQ5TDP6 509 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 TAOK1Q7L7X3 1001 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 ERGIC2Q96RQ1 377 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 FBXO28Q9NVF7 368 aa12.7□□□□□ -0.38
RBM39-223ENST00000463004 MANSC4A6NHS7 340 aaPredicted RBP12.69□□□□□ -0.38
RBM39-223ENST00000463004 CCDC188H7C350 402 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 KPNA6O60684 536 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 CALB1P05937 261 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 SNHG28P0DPA3 235 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 PPFIA1Q13136 1202 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 USP49Q70CQ1 688 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 C17orf53Q8N3J3 647 aaPredicted RBP12.69□□□□□ -0.38
RBM39-223ENST00000463004 ZKSCAN4Q969J2 545 aaPredicted RBP12.69□□□□□ -0.38
RBM39-223ENST00000463004 INTS2Q9H0H0 1204 aaKnown RBP12.69□□□□□ -0.38
RBM39-223ENST00000463004 PXMP2Q9NR77 195 aa12.69□□□□□ -0.38
RBM39-223ENST00000463004 E7EVH7 732 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms