RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 DSC3Q14574 896 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 PLCB4Q15147 1175 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 TPRNQ4KMQ1 711 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 SWT1Q5T5J6 900 aaKnown RBP8.86□□□□□ -0.99
SMC3-202ENST00000462899 USP17L6PQ6QN14 398 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 THSD4Q6ZMP0 1018 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 SLC24A5Q71RS6 500 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 METTL3Q86U44 580 aaKnown RBP8.86□□□□□ -0.99
SMC3-202ENST00000462899 NME8Q8N427 588 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 KRI1Q8N9T8 703 aaKnown RBP8.86□□□□□ -0.99
SMC3-202ENST00000462899 TRAPPC12Q8WVT3 735 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 CASD1Q96PB1 797 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 DSCC1Q9BVC3 393 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 ELAC1Q9H777 363 aaKnown RBP8.86□□□□□ -0.99
SMC3-202ENST00000462899 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 TMEM161AQ9NX61 479 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 LRFN2Q9ULH4 789 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 NOC2LQ9Y3T9 749 aaKnown RBP8.86□□□□□ -0.99
SMC3-202ENST00000462899 PCDHB7Q9Y5E2 793 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 UBIAD1Q9Y5Z9 338 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 FRYQ5TBA9 3013 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 ZZEF1O43149 2961 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 MYH15Q9Y2K3 1946 aa8.86□□□□□ -0.99
SMC3-202ENST00000462899 DOCK6Q96HP0 2047 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 IGKV6D-21A0A0A0MT36 114 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 RCCD1A6NED2 376 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 ZBTB42B2RXF5 422 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 CLASP2O75122 1294 aaKnown RBP8.85□□□□□ -0.99
SMC3-202ENST00000462899 ZMYND10O75800 440 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 EOMESO95936 686 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 FGFR1P11362 822 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 SDSP20132 328 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 MTHFRP42898 656 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 MFAP1P55081 439 aaKnown RBP8.85□□□□□ -0.99
SMC3-202ENST00000462899 KRT76Q01546 638 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 MTHFD1LQ6UB35 978 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 KCNT2Q6UVM3 1135 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 PLPPR4Q7Z2D5 763 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 DGLUCYQ7Z3D6 616 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 NLRX1Q86UT6 975 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 FAM228AQ86W67 206 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 MRPL43Q8N983 215 aaKnown RBP8.85□□□□□ -0.99
SMC3-202ENST00000462899 TDRD5Q8NAT2 981 aaKnown RBP8.85□□□□□ -0.99
SMC3-202ENST00000462899 DTWD2Q8NBA8 298 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 GLG1Q92896 1179 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 CDHR1Q96JP9 859 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 ADAM2Q99965 735 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 UBAC1Q9BSL1 405 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 KRT23Q9C075 422 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 IL25Q9H293 177 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 SEMA4AQ9H3S1 761 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 CNNM2Q9H8M5 875 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 ENTPD7Q9NQZ7 604 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 DUSP12Q9UNI6 340 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 CACNA1GO43497 2377 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 SPEGQ15772 3267 aa8.85□□□□□ -0.99
SMC3-202ENST00000462899 M0QZ92 97 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 RPS6KA5O75582 802 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 ATG7O95352 703 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 LMNAP02545 664 aaKnown RBP8.84□□□□□ -0.99
SMC3-202ENST00000462899 WEE2P0C1S8 567 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 PPM1AP35813 382 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 PBX3P40426 434 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 PUM1Q14671 1186 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMC3-202ENST00000462899 SMC1AQ14683 1233 aaKnown RBP8.84□□□□□ -0.99
SMC3-202ENST00000462899 IMMTQ16891 758 aaKnown RBP8.84□□□□□ -0.99
SMC3-202ENST00000462899 SPOUT1Q5T280 376 aaKnown RBP8.84□□□□□ -0.99
SMC3-202ENST00000462899 CES5AQ6NT32 575 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 KIAA0319LQ8IZA0 1049 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 SLC39A11Q8N1S5 342 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 CNTNAP3BQ96NU0 1288 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 RTP3Q9BQQ7 232 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 SPZ1Q9BXG8 430 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 CNTNAP3Q9BZ76 1288 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 TMEM117Q9H0C3 514 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 JPH1Q9HDC5 661 aaPredicted RBP8.84□□□□□ -0.99
SMC3-202ENST00000462899 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 ST3GAL5Q9UNP4 418 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 IRAK3Q9Y616 596 aa8.84□□□□□ -0.99
SMC3-202ENST00000462899 NFASCO94856 1347 aa8.83□□□□□ -1
SMC3-202ENST00000462899 MAFGO15525 162 aa8.83□□□□□ -1
SMC3-202ENST00000462899 GPR32O75388 356 aa8.83□□□□□ -1
SMC3-202ENST00000462899 NFX1Q12986 1120 aaKnown RBP8.83□□□□□ -1
SMC3-202ENST00000462899 MTMR1Q13613 665 aa8.83□□□□□ -1
SMC3-202ENST00000462899 CLLU1OSQ5K130 101 aa8.83□□□□□ -1
SMC3-202ENST00000462899 RARS2Q5T160 578 aaKnown RBP8.83□□□□□ -1
SMC3-202ENST00000462899 ANKRD45Q5TZF3 282 aa8.83□□□□□ -1
SMC3-202ENST00000462899 KANK3Q6NY19 840 aa8.83□□□□□ -1
SMC3-202ENST00000462899 ZNF598Q86UK7 904 aaKnown RBP8.83□□□□□ -1
SMC3-202ENST00000462899 KIAA2013Q8IYS2 634 aa8.83□□□□□ -1
SMC3-202ENST00000462899 LRRC43Q8N309 656 aa8.83□□□□□ -1
SMC3-202ENST00000462899 C12orf76Q8N812 135 aaPredicted RBP8.83□□□□□ -1
SMC3-202ENST00000462899 FLCNQ8NFG4 579 aa8.83□□□□□ -1
SMC3-202ENST00000462899 SMARCC2Q8TAQ2 1214 aa8.83□□□□□ -1
SMC3-202ENST00000462899 SLC22A17Q8WUG5 538 aa8.83□□□□□ -1
SMC3-202ENST00000462899 ZNF558Q96NG5 402 aa8.83□□□□□ -1
SMC3-202ENST00000462899 ZBP1Q9H171 429 aa8.83□□□□□ -1
SMC3-202ENST00000462899 MFSD1Q9H3U5 465 aa8.83□□□□□ -1
SMC3-202ENST00000462899 JADE2Q9NQC1 790 aa8.83□□□□□ -1
SMC3-202ENST00000462899 CYP26B1Q9NR63 512 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms