RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 ATP6V0A1Q93050 837 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 TIPINQ9BVW5 301 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 LSM14BQ9BX40 385 aaKnown RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 LARSQ9P2J5 1176 aaKnown RBP15.89■□□□□ 0.13
HDAC6-213ENST00000462730 PLXNA1Q9UIW2 1896 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 MCM3APO60318 1980 aa15.89■□□□□ 0.13
HDAC6-213ENST00000462730 PPP1R37O75864 691 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 PLS3P13797 630 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 CASP4P49662 377 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 NFIL3Q16649 462 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 SWSAP1Q6NVH7 229 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 HS2ST1Q7LGA3 356 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 SAPCD2Q86UD0 394 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 DRC1Q96MC2 740 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 STRA6Q9BX79 667 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 LZTFL1Q9NQ48 299 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 ARID2Q68CP9 1835 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 PASKQ96RG2 1323 aa15.88■□□□□ 0.13
HDAC6-213ENST00000462730 A0A0U1RQJ8 604 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 ZNF862O60290 1169 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 DKC1O60832 514 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 NDUFA10O95299 355 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 SLU7O95391 586 aaKnown RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 MAPTP10636 758 aaKnown RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 PPP2R3AQ06190 1150 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 KCNH2Q12809 1159 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 ANO5Q75V66 913 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 CCDC60Q8IWA6 550 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 ATRIPQ8WXE1 791 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 GBP3Q9H0R5 595 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 METTL14Q9HCE5 456 aaKnown RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 GPRC5CQ9NQ84 441 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 EPN1Q9Y6I3 576 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 V9GYY5 206 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 GNG11P61952 73 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 ALCAMQ13740 583 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 FAM110CQ1W6H9 321 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 DCAF17Q5H9S7 520 aaPredicted RBP15.87■□□□□ 0.13
HDAC6-213ENST00000462730 FAM102BQ5T8I3 360 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 MIS18BP1Q6P0N0 1132 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 ABHD15Q6UXT9 468 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 OTUD6AQ7L8S5 288 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 SYCP3Q8IZU3 236 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 CRACR2AQ9BSW2 395 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 AGPAT3Q9NRZ7 376 aa15.87■□□□□ 0.13
HDAC6-213ENST00000462730 FARP2O94887 1054 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 STBD1O95210 358 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 AFPP02771 609 aaKnown RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 SUPT20HL2P0C7V6 817 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 XRCC5P13010 732 aaKnown RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 ADORA2AP29274 412 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 CYP2J2P51589 502 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 PRKCEQ02156 737 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 ELF2Q15723 593 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 RGMBQ6NW40 437 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 PDXDC1Q6P996 788 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 RRAGAQ7L523 313 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 FBXO16Q8IX29 292 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 FAM186BQ8IYM0 893 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 GOLGA5Q8TBA6 731 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 BAP1Q92560 729 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 CEP170P1Q96L14 293 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 EDEM3Q9BZQ6 932 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 SYNGAP1Q96PV0 1343 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 IGSF9BQ9UPX0 1349 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 LRRC53A6NM62 1247 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 IGF2BP3O00425 579 aaKnown RBP eCLIP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 CYLC1P35663 651 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 CDK17Q00537 523 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 TCERG1LQ5VWI1 586 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 FBXO38Q6PIJ6 1188 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 ACCSQ96QU6 501 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 L2HGDHQ9H9P8 463 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 NHEJ1Q9H9Q4 299 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 CEP72Q9P209 647 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 SEPT9Q9UHD8 586 aaPredicted RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 REXO2Q9Y3B8 237 aaKnown RBP15.86■□□□□ 0.13
HDAC6-213ENST00000462730 IVNS1ABPQ9Y6Y0 642 aa15.86■□□□□ 0.13
HDAC6-213ENST00000462730 MANSC4A6NHS7 340 aaPredicted RBP15.85■□□□□ 0.13
HDAC6-213ENST00000462730 FANCGO15287 622 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 NOL4O94818 638 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 ARIH2O95376 493 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 TGFB3P10600 412 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 HNRNPH3P31942 346 aaKnown RBP15.85■□□□□ 0.13
HDAC6-213ENST00000462730 PSMC2P35998 433 aaKnown RBP15.85■□□□□ 0.13
HDAC6-213ENST00000462730 PEX3P56589 373 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 NEDD9Q14511 834 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 LY6KQ17RY6 165 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 ARHGAP29Q52LW3 1261 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 MORC4Q8TE76 937 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 WDR24Q96S15 920 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 DMAC2Q9NW81 257 aa15.85■□□□□ 0.13
HDAC6-213ENST00000462730 MYH9P35579 1960 aaKnown RBP15.85■□□□□ 0.13
HDAC6-213ENST00000462730 LOC102724159A0A0B4J2E5 919 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 SLC16A4O15374 487 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 GGPS1O95749 300 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 SLC10A3P09131 477 aa15.84■□□□□ 0.13
HDAC6-213ENST00000462730 CASQ1P31415 396 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms