RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 PCYT2Q99447 389 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 TIPINQ9BVW5 301 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 SUGCTQ9HAC7 445 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 CYP26B1Q9NR63 512 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 RGL1Q9NZL6 768 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 KCND2Q9NZV8 630 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 CALCOCO1Q9P1Z2 691 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 TFIP11Q9UBB9 837 aaKnown RBP8.62□□□□□ -1.03
USP4-207ENST00000462673 KIAA1024Q9UPX6 916 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 CLIC4Q9Y696 253 aa8.62□□□□□ -1.03
USP4-207ENST00000462673 ARHGEF35A5YM69 484 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 POTEMA6NI47 508 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 CUTAO60888 179 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 MAFO75444 373 aaPredicted RBP8.61□□□□□ -1.03
USP4-207ENST00000462673 IQCF3P0C7M6 154 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 CKBP12277 381 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 LIG1P18858 919 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 HOXC8P31273 242 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 ABCD1P33897 745 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 ME1P48163 572 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 ADAM17P78536 824 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 FPGSQ05932 587 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 RBL2Q08999 1139 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 TFDP1Q14186 410 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 PCBP1Q15365 356 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP4-207ENST00000462673 ZRSR1Q15695 479 aaKnown RBP8.61□□□□□ -1.03
USP4-207ENST00000462673 MTERF2Q49AM1 385 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 TPRNQ4KMQ1 711 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 CABP7Q86V35 215 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 LINC00301Q8NCQ3 95 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 CCDC150Q8NCX0 1101 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 APBB2Q92870 758 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 USP28Q96RU2 1077 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP4-207ENST00000462673 CCSER1Q9C0I3 900 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 PDLIM7Q9NR12 457 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 KCND1Q9NSA2 647 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 DACT1Q9NYF0 836 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 RCOR1Q9UKL0 485 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 TBX21Q9UL17 535 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 FRMPD3Q5JV73 1810 aa8.61□□□□□ -1.03
USP4-207ENST00000462673 PHLPP2Q6ZVD8 1323 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 GPR182O15218 404 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 CCP110O43303 1012 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 SLU7O95391 586 aaKnown RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 EYA4O95677 639 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 FGBP02675 491 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 TUBB4AP04350 444 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 ATP4AP20648 1035 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 SCP2P22307 547 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 MARCKSP29966 332 aaPredicted RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 BMP8BP34820 402 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 ZNF165P49910 485 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 POU5F1BQ06416 359 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 LRMPQ12912 555 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 IKBKEQ14164 716 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 PPP2R5AQ15172 486 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 PTPAQ15257 358 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 TARBP2Q15633 366 aaKnown RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 PTPN14Q15678 1187 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 HYIQ5T013 277 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 RRAGBQ5VZM2 374 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 ADALQ6DHV7 355 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 PSRC1Q6PGN9 363 aaPredicted RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 ANO5Q75V66 913 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 LRRC8DQ7L1W4 858 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 IQUBQ8NA54 791 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 LEO1Q8WVC0 666 aaPredicted RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 DNAJB3Q8WWF6 145 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 PSPC1Q8WXF1 523 aaKnown RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 SEPT8Q92599 483 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 BADQ92934 168 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 MTRQ99707 1265 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 NOC4LQ9BVI4 516 aaKnown RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 FTHL17Q9BXU8 183 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 GCOM2Q9BZD3 368 aaPredicted RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 PPP1R12CQ9BZL4 782 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 UBE2OQ9C0C9 1292 aaKnown RBP8.6□□□□□ -1.03
USP4-207ENST00000462673 CUEDC2Q9H467 287 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 C17orf75Q9HAS0 396 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 ATP6V0A4Q9HBG4 840 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 AKT3Q9Y243 479 aa8.6□□□□□ -1.03
USP4-207ENST00000462673 ABHD14A-ACY1A0A1B0GW23 586 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 A0A1W2PPC1 479 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 TRIM43BA6NCK2 446 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 H0YCG3 227 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 H0YGN5 161 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 WNT7AO00755 349 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 ZNF862O60290 1169 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 MED24O75448 989 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 SPATA31C1P0DKV0 1188 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 SYN1P17600 705 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 KCNJ6P48051 423 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 RARRES1P49788 294 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 CRYBB1P53674 252 aaPredicted RBP8.59□□□□□ -1.03
USP4-207ENST00000462673 SMTNP53814 917 aa8.59□□□□□ -1.03
USP4-207ENST00000462673 FAM26DQ5JW98 314 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms