RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 TACR1P25103 407 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 SQSTM1Q13501 440 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 TAF7LQ5H9L4 462 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 TTC22Q5TAA0 569 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 JAZF1Q86VZ6 243 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 SCUBE1Q8IWY4 988 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 ASIC4Q96FT7 647 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 NYXQ9GZU5 481 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 TFCP2L1Q9NZI6 479 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 ACSL6Q9UKU0 697 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 RWDD3Q9Y3V2 267 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 ANKRD36CQ5JPF3 1778 aa8.86□□□□□ -0.99
UBE4B-204ENST00000462658 SALL3Q9BXA9 1300 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 ANKRD18BA2A2Z9 1011 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 ZNF503-AS2A6NEH8 195 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 EYA2O00167 538 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 CIAO1O76071 339 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 IFIT2P09913 472 aaKnown RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 GYS1P13807 737 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 IL15P40933 162 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 TFCP2Q12800 502 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 SNX17Q15036 470 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 SLC10A5Q5PT55 438 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 E4F1Q66K89 784 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 MCTP1Q6DN14 999 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 KCNT2Q6UVM3 1135 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 ATG9AQ7Z3C6 839 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 AACSQ86V21 672 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 NBPF5PQ86XG9 351 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 RCBTB1Q8NDN9 531 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 LIN37Q96GY3 246 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 RNPC3Q96LT9 517 aaKnown RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 DHRS4Q9BTZ2 278 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 GREM2Q9H772 168 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 STK32BQ9NY57 414 aa8.85□□□□□ -0.99
UBE4B-204ENST00000462658 YBX2Q9Y2T7 364 aaKnown RBP8.85□□□□□ -0.99
UBE4B-204ENST00000462658 AOX1Q06278 1338 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 NPHS1O60500 1241 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 GSPT1P15170 499 aaKnown RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 LTBRP36941 435 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 CYP4F8P98187 520 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 NFIXQ14938 502 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 LONRF2Q1L5Z9 754 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 CCDC152Q4G0S7 254 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 LRRC24Q50LG9 513 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 TSHZ3Q63HK5 1081 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 COL23A1Q86Y22 540 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 DPF3Q92784 378 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 KISS1RQ969F8 398 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 EAF2Q96CJ1 260 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 IPO9Q96P70 1041 aaKnown RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 PUS3Q9BZE2 481 aaKnown RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 CCDC8Q9H0W5 538 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 FBXL7Q9UJT9 491 aa8.84□□□□□ -0.99
UBE4B-204ENST00000462658 MRPS23Q9Y3D9 190 aaKnown RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 MRPL42Q9Y6G3 142 aaKnown RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.84□□□□□ -0.99
UBE4B-204ENST00000462658 KIAA1551Q9HCM1 1747 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 MSCO60682 206 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 PNLIPP16233 465 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 SDSP20132 328 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 KCNAB2Q13303 367 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 SF3B3Q15393 1217 aaKnown RBP8.83□□□□□ -1
UBE4B-204ENST00000462658 IQCEQ6IPM2 695 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 GIMAP6Q6P9H5 292 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 ZSWIM2Q8NEG5 633 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 GPATCH3Q96I76 525 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 GPR108Q9NPR9 543 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 FPGT-TNNI3KV9GXZ4 949 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 SCN7AQ01118 1682 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 CARMIL3Q8ND23 1372 aa8.83□□□□□ -1
UBE4B-204ENST00000462658 TTC41PQ6P2S7 1318 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 ESYT3A0FGR9 886 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 ERC2O15083 957 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 NPHP1O15259 732 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 TM4SF1P30408 202 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 SUMO1P63165 101 aaKnown RBP8.82□□□□□ -1
UBE4B-204ENST00000462658 TESK1Q15569 626 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 ADGRF1Q5T601 910 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 NOP9Q86U38 636 aaKnown RBP8.82□□□□□ -1
UBE4B-204ENST00000462658 INTS4Q96HW7 963 aaKnown RBP8.82□□□□□ -1
UBE4B-204ENST00000462658 PHF20Q9BVI0 1012 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 CRTAC1Q9NQ79 661 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 CNNM1Q9NRU3 951 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.82□□□□□ -1
UBE4B-204ENST00000462658 MARCH2Q9P0N8 246 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 RIPOR2Q9Y4F9 1068 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 TRAF6Q9Y4K3 522 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 PCDHA2Q9Y5H9 948 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 NPFFR2Q9Y5X5 522 aa8.82□□□□□ -1
UBE4B-204ENST00000462658 CDC45O75419 566 aa8.81□□□□□ -1
UBE4B-204ENST00000462658 GLRX3O76003 335 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms