RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 TMCO2Q7Z6W1 182 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-216ENST00000462421 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 ZBTB8OSQ8IWT0 167 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 TMEM192Q8IY95 271 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 CMTR2Q8IYT2 770 aaKnown RBP9.98□□□□□ -0.81
DDX39B-216ENST00000462421 GDPD5Q8WTR4 605 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 PGBD4Q96DM1 585 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 ZBTB10Q96DT7 871 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 TMX3Q96JJ7 454 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 TBC1D32Q96NH3 1257 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 EIF2AK1Q9BQI3 630 aaKnown RBP9.98□□□□□ -0.81
DDX39B-216ENST00000462421 MRPL9Q9BYD2 267 aaKnown RBP9.98□□□□□ -0.81
DDX39B-216ENST00000462421 TRIM6Q9C030 488 aaPredicted RBP9.98□□□□□ -0.81
DDX39B-216ENST00000462421 VAV3Q9UKW4 847 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 COG5Q9UP83 839 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 PIN4Q9Y237 131 aaKnown RBP9.98□□□□□ -0.81
DDX39B-216ENST00000462421 COL4A3BPQ9Y5P4 624 aa9.98□□□□□ -0.81
DDX39B-216ENST00000462421 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 TBKBP1A7MCY6 615 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 ADAMTS3O15072 1205 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 NCK2O43639 380 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 MAFO75444 373 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 DGAT1O75907 488 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 GJB2P29033 226 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 CA8P35219 290 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 CCT6AP40227 531 aaKnown RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 GPC3P51654 580 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 MRPS5P82675 430 aaKnown RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 HTRA4P83105 476 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 RNASELQ05823 741 aaKnown RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 PCBP1Q15365 356 aaKnown RBP eCLIP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 NPY5RQ15761 445 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 EPC2Q52LR7 807 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 NAALADL2Q58DX5 795 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 DTHD1Q6ZMT9 781 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 THNSL1Q8IYQ7 743 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 LRRC43Q8N309 656 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 MCPH1Q8NEM0 835 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 URGCPQ8TCY9 931 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 MICAL1Q8TDZ2 1067 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 ATXN2LQ8WWM7 1075 aaKnown RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 IFT74Q96LB3 600 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 FAM193BQ96PV7 902 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 NACC1Q96RE7 527 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 PLVAPQ9BX97 442 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 LMAN2LQ9H0V9 348 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 TUFT1Q9NNX1 390 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 CHST12Q9NRB3 414 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 BMP2KQ9NSY1 1161 aaPredicted RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 ANKEF1Q9NU02 776 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 TMEM161AQ9NX61 479 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 LRWD1Q9UFC0 647 aa9.97□□□□□ -0.81
DDX39B-216ENST00000462421 PUF60Q9UHX1 559 aaKnown RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 NOC2LQ9Y3T9 749 aaKnown RBP9.97□□□□□ -0.81
DDX39B-216ENST00000462421 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 LCHNA4D1U4 455 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 VPS37CA5D8V6 355 aaPredicted RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 ZNF862O60290 1169 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 DTNBO60941 627 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 NR1I2O75469 434 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 SRGAP2CP0DJJ0 459 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 DARSP14868 501 aaKnown RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 LAG3P18627 525 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 ATP4AP20648 1035 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 MUTP22033 750 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 PPM1AP35813 382 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 KRT17Q04695 432 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 GRB10Q13322 594 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 GPNMBQ14956 572 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 PPP2R5AQ15172 486 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 ZRSR1Q15695 479 aaKnown RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 TJAP1Q5JTD0 557 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 GLB1LQ6UWU2 654 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 SRGAP1Q7Z6B7 1085 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 FAM228AQ86W67 206 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 RNF149Q8NC42 400 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 SNX29Q8TEQ0 813 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 HLA-CQ95604 372 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 MRPL38Q96DV4 380 aaKnown RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 ELAC1Q9H777 363 aaKnown RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 AGO3Q9H9G7 860 aaKnown RBP9.96□□□□□ -0.82
DDX39B-216ENST00000462421 ERVK-5Q9HDB9 667 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 RGS18Q9NS28 235 aa9.96□□□□□ -0.82
DDX39B-216ENST00000462421 KAT6AQ92794 2004 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 A0A087WZ62 844 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 FAM205CA6NFA0 338 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 INO80B-WBP1J3KQ70 363 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 EML1O00423 815 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 DLL1O00548 723 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 USO1O60763 962 aaKnown RBP9.95□□□□□ -0.82
DDX39B-216ENST00000462421 GPR32O75388 356 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 DGKIO75912 1065 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 EOMESO95936 686 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDX39B-216ENST00000462421 TXLNAP40222 546 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 FAM102BQ5T8I3 360 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 ANO5Q75V66 913 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 BRAPQ7Z569 592 aa9.95□□□□□ -0.82
DDX39B-216ENST00000462421 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms