RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NACC1Q96RE7 527 aa17.68■□□□□ 0.42
ERCC3-206ENST00000462306 MMTAG2Q9BU76 263 aaKnown RBP17.68■□□□□ 0.42
ERCC3-206ENST00000462306 TSPYL2Q9H2G4 693 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-206ENST00000462306 BMP2KQ9NSY1 1161 aaPredicted RBP17.68■□□□□ 0.42
ERCC3-206ENST00000462306 DBR1Q9UK59 544 aaKnown RBP17.68■□□□□ 0.42
ERCC3-206ENST00000462306 GPR182O15218 404 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 TLL1O43897 1013 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 GAS2O43903 313 aaKnown RBP17.67■□□□□ 0.42
ERCC3-206ENST00000462306 DGAT1O75907 488 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 ARHGEF15O94989 841 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 CA3P07451 260 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 CDC25AP30304 524 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 NFX1Q12986 1120 aaKnown RBP17.67■□□□□ 0.42
ERCC3-206ENST00000462306 SF3A1Q15459 793 aaKnown RBP17.67■□□□□ 0.42
ERCC3-206ENST00000462306 FAM117BQ6P1L5 589 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 FAM43BQ6ZT52 329 aaPredicted RBP17.67■□□□□ 0.42
ERCC3-206ENST00000462306 RHPN2Q8IUC4 686 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 KSR1Q8IVT5 923 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 PRPF31Q8WWY3 499 aaKnown RBP17.67■□□□□ 0.42
ERCC3-206ENST00000462306 NLRP7Q8WX94 980 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 GUCD1Q96NT3 240 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 RAD9AQ99638 391 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 ZBED2Q9BTP6 218 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 SLC28A3Q9HAS3 691 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 STK24Q9Y6E0 443 aa17.67■□□□□ 0.42
ERCC3-206ENST00000462306 A0A087WZ62 844 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 LCHNA4D1U4 455 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 VWA3AA6NCI4 1184 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 MGEA5O60502 916 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 BMP15O95972 392 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 HSP90AA1P07900 732 aaKnown RBP17.66■□□□□ 0.42
ERCC3-206ENST00000462306 HTRA4P83105 476 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-206ENST00000462306 ODR4Q5SWX8 454 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 ZNF410Q86VK4 478 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 CRIPAKQ8N1N5 446 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 TCP11Q8WWU5 503 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 PSPC1Q8WXF1 523 aaKnown RBP17.66■□□□□ 0.42
ERCC3-206ENST00000462306 SCLT1Q96NL6 688 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 MTRQ99707 1265 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 FDXACB1Q9BRP7 624 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-206ENST00000462306 ZSCAN16Q9H4T2 348 aaPredicted RBP17.66■□□□□ 0.42
ERCC3-206ENST00000462306 ATP6V0A4Q9HBG4 840 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 COL4A3BPQ9Y5P4 624 aa17.66■□□□□ 0.42
ERCC3-206ENST00000462306 CHD9Q3L8U1 2897 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
ERCC3-206ENST00000462306 UPP2O95045 317 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 LAMTOR4Q0VGL1 99 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 DSC3Q14574 896 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 PTPAQ15257 358 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 KRT79Q5XKE5 535 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 PPP2R2DQ66LE6 453 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 SPRYD3Q8NCJ5 442 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 NLRP4Q96MN2 994 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 CCDC43Q96MW1 224 aaKnown RBP17.65■□□□□ 0.42
ERCC3-206ENST00000462306 GCOM2Q9BZD3 368 aaPredicted RBP17.65■□□□□ 0.42
ERCC3-206ENST00000462306 IFT122Q9HBG6 1241 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 KIAA1024Q9UPX6 916 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 INSL6Q9Y581 213 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 CLIC4Q9Y696 253 aa17.65■□□□□ 0.42
ERCC3-206ENST00000462306 TTC3P53804 2025 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 ASAP2O43150 1006 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 USO1O60763 962 aaKnown RBP17.64■□□□□ 0.41
ERCC3-206ENST00000462306 FGFR4P22455 802 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 ARL2P36404 184 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 TAP1Q03518 808 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 SP7Q8TDD2 431 aaPredicted RBP17.64■□□□□ 0.41
ERCC3-206ENST00000462306 CDX2Q99626 313 aaPredicted RBP17.64■□□□□ 0.41
ERCC3-206ENST00000462306 ADAM2Q99965 735 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 RGS18Q9NS28 235 aa17.64■□□□□ 0.41
ERCC3-206ENST00000462306 DDX19AQ9NUU7 478 aaKnown RBP17.64■□□□□ 0.41
ERCC3-206ENST00000462306 PDIA4P13667 645 aaKnown RBP17.63■□□□□ 0.41
ERCC3-206ENST00000462306 GRIN1Q05586 938 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 HYIQ5T013 277 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 PADI6Q6TGC4 694 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 SPRED2Q7Z698 418 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 ASAP3Q8TDY4 903 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 AK8Q96MA6 479 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 INO80BQ9C086 356 aaPredicted RBP17.63■□□□□ 0.41
ERCC3-206ENST00000462306 BHMT2Q9H2M3 363 aa17.63■□□□□ 0.41
ERCC3-206ENST00000462306 RC3H2Q9HBD1 1191 aaKnown RBP17.63■□□□□ 0.41
ERCC3-206ENST00000462306 DENND3A2RUS2 1198 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 LINC01553A4QN01 128 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 ARHGEF35A5YM69 484 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 C9IYK1 514 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 E9PMD0 336 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 SRGAP2CP0DJJ0 459 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 CYP11B2P19099 503 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 GLRA2P23416 452 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 MXD4Q14582 209 aaPredicted RBP17.62■□□□□ 0.41
ERCC3-206ENST00000462306 SLC24A5Q71RS6 500 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 KCNK18Q7Z418 384 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 NPAS4Q8IUM7 802 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 RNF149Q8NC42 400 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 PNMA5Q96PV4 448 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 USP28Q96RU2 1077 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 MINDY3Q9H8M7 445 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
ERCC3-206ENST00000462306 C1orf112Q9NSG2 853 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms