RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 DHCR24Q15392 516 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 MAPRE1Q15691 268 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 IFI16Q16666 785 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CDKAL1Q5VV42 579 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CDCP2Q5VXM1 449 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 FOXB2Q5VYV0 432 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 TSHZ3Q63HK5 1081 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CXorf57Q6NSI4 855 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CNNM4Q6P4Q7 775 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 VHLLQ6RSH7 139 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 NLRC3Q7RTR2 1065 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 SPRED2Q7Z698 418 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 AACSQ86V21 672 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 WFDC3Q8IUB2 231 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CLASRPQ8N2M8 674 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 GPATCH11Q8N954 259 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 GRAPLQ8TC17 118 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 BCL7CQ8WUZ0 217 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 DDX1Q92499 740 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 RPGRQ92834 1020 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 EXOC2Q96KP1 924 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 Q96M66 194 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 MPHOSPH8Q99549 860 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 DHRS4Q9BTZ2 278 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CCDC8Q9H0W5 538 aaPredicted RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CNNM2Q9H8M5 875 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 GPR108Q9NPR9 543 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 JADE2Q9NQC1 790 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CNNM1Q9NRU3 951 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 TAGLN3Q9UI15 199 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 DBNLQ9UJU6 430 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF180Q9UJW8 692 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 MRPS23Q9Y3D9 190 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 CAPN6Q9Y6Q1 641 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 SCINQ9Y6U3 715 aa5.52□□□□□ -1.53
CSMD3-205ENST00000462254 BAZ2AQ9UIF9 1905 aaKnown RBP5.52□□□□□ -1.53
CSMD3-205ENST00000462254 TIAM2Q8IVF5 1701 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 MROH5Q6ZUA9 1318 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 FAM86C2PA6NEL3 165 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 WTIPA6NIX2 430 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 TAF5LO75529 589 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 PDE8BO95263 885 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF865P0CJ78 1059 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 NME1P15531 152 aaKnown RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 NPR1P16066 1061 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 POU3F2P20265 443 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 MX1P20591 662 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 FGFR2P21802 821 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 CHRNA5P30532 468 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 ADORA1P30542 326 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 L1CAMP32004 1257 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 ETV3P41162 512 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 HTR3AP46098 478 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 TIMM10P62072 90 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 RPS8P62241 208 aaKnown RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 TNK2Q07912 1038 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 METTL24Q5JXM2 366 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 TTC22Q5TAA0 569 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF574Q6ZN55 896 aaPredicted RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 SPATS2Q86XZ4 545 aaKnown RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 MFSD4AQ8N468 514 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 PI4K2BQ8TCG2 481 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 RBM17Q96I25 401 aaKnown RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 HSPA12BQ96MM6 686 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 CRAMP1Q96RY5 1269 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 SLC9A7Q96T83 725 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 YIPF4Q9BSR8 244 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 KRTAP4-6Q9BYQ5 205 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 OBP2AQ9NY56 170 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 MAP3K20Q9NYL2 800 aaKnown RBP5.51□□□□□ -1.53
CSMD3-205ENST00000462254 STAP2Q9UGK3 403 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 MINPP1Q9UNW1 487 aa5.51□□□□□ -1.53
CSMD3-205ENST00000462254 AOX1Q06278 1338 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 TTC41PQ6P2S7 1318 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 IRS2Q9Y4H2 1338 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 MYH8P13535 1937 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 LAMB1P07942 1786 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 TMEM265A0A087WTH1 108 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 WASH4PA8MWX3 477 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 FAM155AB1AL88 458 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-205ENST00000462254 PRPF3O43395 683 aaKnown RBP5.5□□□□□ -1.53
CSMD3-205ENST00000462254 WNT11O96014 354 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 SDSP20132 328 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 PTMSP20962 102 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 KCNA3P22001 575 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 CYP7A1P22680 504 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 POLD1P28340 1107 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 GBP1P32455 592 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 STRN3Q13033 797 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 PICALMQ13492 652 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 STAT4Q14765 748 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 ATP2B3Q16720 1220 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 AOC3Q16853 763 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 ERAP2Q6P179 960 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 OLFM4Q6UX06 510 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 LHFPL2Q6ZUX7 228 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 C2CD5Q86YS7 1000 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms