RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 GOLGA6L4A6NEF3 574 aa17.43■□□□□ 0.38
SF3A3-203ENST00000461869 M0R2N6 131 aa17.43■□□□□ 0.38
SF3A3-203ENST00000461869 NRIP1P48552 1158 aa17.43■□□□□ 0.38
SF3A3-203ENST00000461869 COASYQ13057 564 aa17.43■□□□□ 0.38
SF3A3-203ENST00000461869 RBM23Q86U06 439 aaKnown RBP17.43■□□□□ 0.38
SF3A3-203ENST00000461869 SMRP1Q8NCR6 262 aa17.43■□□□□ 0.38
SF3A3-203ENST00000461869 TRAPPC12Q8WVT3 735 aa17.43■□□□□ 0.38
SF3A3-203ENST00000461869 TFIP11Q9UBB9 837 aaKnown RBP17.43■□□□□ 0.38
SF3A3-203ENST00000461869 IBSPP21815 317 aaPredicted RBP17.42■□□□□ 0.38
SF3A3-203ENST00000461869 GATMP50440 423 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 STAT5BP51692 787 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 PLCB4Q15147 1175 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 NONOQ15233 471 aaKnown RBP eCLIP17.42■□□□□ 0.38
SF3A3-203ENST00000461869 SF3A1Q15459 793 aaKnown RBP17.42■□□□□ 0.38
SF3A3-203ENST00000461869 PIK3AP1Q6ZUJ8 805 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 BMP8AQ7Z5Y6 402 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 NME8Q8N427 588 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 MXRA8Q9BRK3 442 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 ANP32EQ9BTT0 268 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 KCNH7Q9NS40 1196 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 PCDHB7Q9Y5E2 793 aa17.42■□□□□ 0.38
SF3A3-203ENST00000461869 MORC2Q9Y6X9 1032 aaPredicted RBP17.42■□□□□ 0.38
SF3A3-203ENST00000461869 SMIM35A0A1B0GVV1 85 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 TMEM221A6NGB7 291 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 M0R296 226 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 TRAK2O60296 914 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 ACTR2P61160 394 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 KRT76Q01546 638 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 CEBPZQ03701 1054 aaKnown RBP17.41■□□□□ 0.38
SF3A3-203ENST00000461869 NFX1Q12986 1120 aaKnown RBP17.41■□□□□ 0.38
SF3A3-203ENST00000461869 AP3B2Q13367 1082 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 ORC2Q13416 577 aaPredicted RBP17.41■□□□□ 0.38
SF3A3-203ENST00000461869 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 KLHL40Q2TBA0 621 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 TRIM67Q6ZTA4 783 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 PLPPR4Q7Z2D5 763 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 LINC00301Q8NCQ3 95 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 MICAL1Q8TDZ2 1067 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 PBXIP1Q96AQ6 731 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 TMX1Q9H3N1 280 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 TLE6Q9H808 572 aa17.41■□□□□ 0.38
SF3A3-203ENST00000461869 BARX2Q9UMQ3 279 aaPredicted RBP17.41■□□□□ 0.38
SF3A3-203ENST00000461869 LOC730098B7Z3J9 87 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 SPTLC2O15270 562 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 PPP6R2O75170 966 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 GLP2RO95838 553 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 SLC39A14Q15043 492 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 SPOUT1Q5T280 376 aaKnown RBP17.4■□□□□ 0.38
SF3A3-203ENST00000461869 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 CYP2W1Q8TAV3 490 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 USP15Q9Y4E8 981 aaPredicted RBP17.4■□□□□ 0.38
SF3A3-203ENST00000461869 PCDHB12Q9Y5F1 795 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 PCDHGC5Q9Y5F6 944 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 CLIC4Q9Y696 253 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 NFASCO94856 1347 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 KDM3AQ9Y4C1 1321 aa17.4■□□□□ 0.38
SF3A3-203ENST00000461869 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
SF3A3-203ENST00000461869 ME1P48163 572 aa17.39■□□□□ 0.37
SF3A3-203ENST00000461869 SARSP49591 514 aaKnown RBP17.39■□□□□ 0.37
SF3A3-203ENST00000461869 CLK2P49760 499 aaKnown RBP17.39■□□□□ 0.37
SF3A3-203ENST00000461869 ZXDAP98168 799 aa17.39■□□□□ 0.37
SF3A3-203ENST00000461869 IER5LQ5T953 404 aa17.39■□□□□ 0.37
SF3A3-203ENST00000461869 PRSS33Q8NF86 280 aa17.39■□□□□ 0.37
SF3A3-203ENST00000461869 NAP1L4Q99733 375 aaKnown RBP17.39■□□□□ 0.37
SF3A3-203ENST00000461869 PHF7Q9BWX1 381 aaPredicted RBP17.39■□□□□ 0.37
SF3A3-203ENST00000461869 AAASQ9NRG9 546 aa17.39■□□□□ 0.37
SF3A3-203ENST00000461869 TBKBP1A7MCY6 615 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 PER2O15055 1255 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 ARP10275 920 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 KLRC1P26715 233 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 SLC26A2P50443 739 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 UBE3AQ05086 875 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 CBX2Q14781 532 aaPredicted RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 NEK8Q86SG6 692 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 SUGP1Q8IWZ8 645 aaKnown RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 SYAP1Q96A49 352 aaPredicted RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 RPGRIP1Q96KN7 1286 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 PHOX2BQ99453 314 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 ADAM2Q99965 735 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 AGO4Q9HCK5 861 aaKnown RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 ERVK-5Q9HDB9 667 aa17.38■□□□□ 0.37
SF3A3-203ENST00000461869 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
SF3A3-203ENST00000461869 KIAA1671Q9BY89 1806 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 DENND3A2RUS2 1198 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 MGEA5O60502 916 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 RPS6KA5O75582 802 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 ATG7O95352 703 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 PTPN5P54829 565 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 ITGB3BPQ13352 177 aaPredicted RBP17.37■□□□□ 0.37
SF3A3-203ENST00000461869 PTPAQ15257 358 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 CEP55Q53EZ4 464 aa17.37■□□□□ 0.37
SF3A3-203ENST00000461869 EARS2Q5JPH6 523 aaKnown RBP17.37■□□□□ 0.37
SF3A3-203ENST00000461869 JAKMIP3Q5VZ66 844 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms