RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 VAV3Q9UKW4 847 aa15.66■□□□□ 0.1
USP4-206ENST00000461553 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.65■□□□□ 0.1
USP4-206ENST00000461553 TMEM150BA6NC51 233 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 HOXA2O43364 376 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
USP4-206ENST00000461553 QARSP47897 775 aaKnown RBP15.65■□□□□ 0.1
USP4-206ENST00000461553 FOSBP53539 338 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 CDC42EP1Q00587 391 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 NR5A1Q13285 461 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 SLFN12Q8IYM2 578 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 ELAC1Q9H777 363 aaKnown RBP15.65■□□□□ 0.1
USP4-206ENST00000461553 ALG13Q9NP73 1137 aaKnown RBP15.65■□□□□ 0.1
USP4-206ENST00000461553 AAASQ9NRG9 546 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 CLDND1Q9NY35 253 aa15.65■□□□□ 0.1
USP4-206ENST00000461553 FAM205CA6NFA0 338 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 DDX11L8A8MPP1 907 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 EML1O00423 815 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 NCK2O43639 380 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 JAK2O60674 1132 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 BAG4O95429 457 aaKnown RBP15.64■□□□□ 0.09
USP4-206ENST00000461553 ITGB1P05556 798 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 P4HBP07237 508 aaKnown RBP15.64■□□□□ 0.09
USP4-206ENST00000461553 DARSP14868 501 aaKnown RBP15.64■□□□□ 0.09
USP4-206ENST00000461553 SFPQP23246 707 aaKnown RBP eCLIP15.64■□□□□ 0.09
USP4-206ENST00000461553 DSC3Q14574 896 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 PLA2G4FQ68DD2 849 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 NCAPH2Q6IBW4 605 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 ABI1Q8IZP0 508 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 KLHL23Q8NBE8 558 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 SH2D3AQ9BRG2 576 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 LXNQ9BS40 222 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 GCOM2Q9BZD3 368 aaPredicted RBP15.64■□□□□ 0.09
USP4-206ENST00000461553 PLAGL2Q9UPG8 496 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 PCDHB12Q9Y5F1 795 aa15.64■□□□□ 0.09
USP4-206ENST00000461553 H3BQ06 376 aaPredicted RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 MAFO75444 373 aaPredicted RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 STBD1O95210 358 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 FGFR1P11362 822 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 DRP2Q13474 957 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 CSPP1Q1MSJ5 1256 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 PUS10Q3MIT2 529 aaKnown RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 EARS2Q5JPH6 523 aaKnown RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 FAM102BQ5T8I3 360 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 PTCRAQ6ISU1 281 aaPredicted RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 ANO5Q75V66 913 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 ZNF410Q86VK4 478 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 DIS3L2Q8IYB7 885 aaKnown RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 LRRC43Q8N309 656 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 NEK9Q8TD19 979 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 SLC7A3Q8WY07 619 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 HAS1Q92839 578 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 TNFRSF25Q93038 417 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 CEP89Q96ST8 783 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 TMEM117Q9H0C3 514 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 CYP26B1Q9NR63 512 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 DACT1Q9NYF0 836 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 SUCLA2Q9P2R7 463 aaPredicted RBP15.63■□□□□ 0.09
USP4-206ENST00000461553 FAM50BQ9Y247 325 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 PPME1Q9Y570 386 aa15.63■□□□□ 0.09
USP4-206ENST00000461553 C5orf42Q9H799 3197 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 IGKV6-21A0A0C4DH24 114 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 SEC24BO95487 1268 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 LAG3P18627 525 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 FGFR4P22455 802 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 POLGP54098 1239 aaPredicted RBP15.62■□□□□ 0.09
USP4-206ENST00000461553 COL19A1Q14993 1142 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 EPHA7Q15375 998 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 RHPN2Q8IUC4 686 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 EXOC8Q8IYI6 725 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 THNSL1Q8IYQ7 743 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 RNF169Q8NCN4 708 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.62■□□□□ 0.09
USP4-206ENST00000461553 POF1BQ8WVV4 589 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 CEP170P1Q96L14 293 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 NLRP4Q96MN2 994 aa15.62■□□□□ 0.09
USP4-206ENST00000461553 INO80BQ9C086 356 aaPredicted RBP15.62■□□□□ 0.09
USP4-206ENST00000461553 A0A087WZ62 844 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 NEMFO60524 1076 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 IL9P15248 144 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 RFC5P40937 340 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 FAM189BP81408 668 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 UBE3AQ05086 875 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 ST3GAL1Q11201 340 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 HYAL1Q12794 435 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 SAFBQ15424 915 aaKnown RBP eCLIP15.61■□□□□ 0.09
USP4-206ENST00000461553 CALCRLQ16602 461 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 ECHDC2Q86YB7 292 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 C4orf19Q8IY42 314 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 COLGALT1Q8NBJ5 622 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 SPPL3Q8TCT6 385 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 FDXACB1Q9BRP7 624 aaPredicted RBP15.61■□□□□ 0.09
USP4-206ENST00000461553 LIMCH1Q9UPQ0 1083 aa15.61■□□□□ 0.09
USP4-206ENST00000461553 PIN4Q9Y237 131 aaKnown RBP15.61■□□□□ 0.09
USP4-206ENST00000461553 BTBD18B2RXH4 712 aa15.6■□□□□ 0.09
USP4-206ENST00000461553 GAS2O43903 313 aaKnown RBP15.6■□□□□ 0.09
USP4-206ENST00000461553 DNAJB1P25685 340 aa15.6■□□□□ 0.09
USP4-206ENST00000461553 YWHABP31946 246 aaKnown RBP15.6■□□□□ 0.09
USP4-206ENST00000461553 NPEPPSP55786 919 aa15.6■□□□□ 0.09
USP4-206ENST00000461553 CYP4A11Q02928 519 aa15.6■□□□□ 0.09
USP4-206ENST00000461553 SPIRE1Q08AE8 756 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms