RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 DZANK1Q9NVP4 752 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 DACT1Q9NYF0 836 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 SORCS3Q9UPU3 1222 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 GINS2Q9Y248 185 aa16.49■□□□□ 0.23
DNMT3A-207ENST00000461228 A0A0U1RQF3 1178 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 GOLGA8AA7E2F4 631 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 GOLGA8BA8MQT2 603 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 CSPG5O95196 566 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 FGFR1P11362 822 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 ZNF76P36508 570 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 GIT2Q14161 759 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 SLC39A11Q8N1S5 342 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 RDM1Q8NG50 284 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 LENG9Q96B70 501 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 PGBD1Q96JS3 809 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 RPGRIP1Q96KN7 1286 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 CDHR5Q9HBB8 845 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 SPG21Q9NZD8 308 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 USTQ9Y2C2 406 aa16.48■□□□□ 0.23
DNMT3A-207ENST00000461228 ARID2Q68CP9 1835 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 OATP04181 439 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 GNA11P29992 359 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 SFNP31947 248 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 POLGP54098 1239 aaPredicted RBP16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 BMS1Q14692 1282 aaKnown RBP16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 IER5LQ5T953 404 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 PLPP4Q5VZY2 271 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 FAM177A1Q8N128 213 aaPredicted RBP16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 CCDC148Q8NFR7 591 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 BICD2Q8TD16 824 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 SNX27Q96L92 541 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 RIT2Q99578 217 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 LRRC2Q9BYS8 371 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 C6orf50Q9HD87 102 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 CHST12Q9NRB3 414 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 FAM217BQ9NTX9 383 aaPredicted RBP16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 HCSTQ9UBK5 93 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 BRPF3Q9ULD4 1205 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 HCFC2Q9Y5Z7 792 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 V9GY48 417 aaPredicted RBP16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 ZNF292O60281 2723 aa16.47■□□□□ 0.23
DNMT3A-207ENST00000461228 MYO10Q9HD67 2058 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 PER2O15055 1255 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 VTNP04004 478 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 DARSP14868 501 aaKnown RBP16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 ZSCAN20P17040 1043 aaPredicted RBP16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 TECP42680 631 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 MTHFRP42898 656 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 GPC3P51654 580 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 JAK3P52333 1124 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 CLLU1OSQ5K130 101 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 KIAA1841Q6NSI8 718 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 CES5AQ6NT32 575 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 LRRC55Q6ZSA7 311 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 CKAP2LQ8IYA6 745 aa16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 MRPL43Q8N983 215 aaKnown RBP16.46■□□□□ 0.23
DNMT3A-207ENST00000461228 KLF18A0A0U1RQI7 1052 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 C2orf71A6NGG8 1288 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 HIDE1A8MVS5 230 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 DDX39AO00148 427 aaKnown RBP16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 AVPR2P30518 371 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 RAB27AP51159 221 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 CLCN3P51790 818 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 VCPP55072 806 aaKnown RBP16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 FOXK2Q01167 660 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 PRKCEQ02156 737 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 ZDHHC14Q8IZN3 488 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 METTL13Q8N6R0 699 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 RIPOR3Q96MK2 946 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 ZBP1Q9H171 429 aa16.45■□□□□ 0.22
DNMT3A-207ENST00000461228 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 PPFIA3O75145 1194 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 SKIP12755 728 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 CDC27P30260 824 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 METAP2P50579 478 aaKnown RBP eCLIP16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 NLRP11P59045 1033 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 TARBP2Q15633 366 aaKnown RBP16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 ZNF410Q86VK4 478 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 PHOX2BQ99453 314 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 AGXT2Q9BYV1 514 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 RHOBTB2Q9BYZ6 727 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 C22orf23Q9BZE7 217 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 GABBR1Q9UBS5 961 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 AKT3Q9Y243 479 aa16.44■□□□□ 0.22
DNMT3A-207ENST00000461228 IGKV6-21A0A0C4DH24 114 aa16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 ZNF862O60290 1169 aa16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 GFRA3O60609 400 aa16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 SFPQP23246 707 aaKnown RBP eCLIP16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 NBL1P41271 181 aa16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 USP11P51784 963 aa16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 EFCAB12Q6NXP0 572 aa16.43■□□□□ 0.22
DNMT3A-207ENST00000461228 MOXD1Q6UVY6 613 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms