RNA–Protein interactions for RNA: ENST00000460659.5

RERE-205, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 2

Gene RERE, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-205ENST00000460659 TBC1D8BQ0IIM8 1120 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 TRAF1Q13077 416 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
RERE-205ENST00000460659 ZC3H14Q6PJT7 736 aaKnown RBP11.72□□□□□ -0.53
RERE-205ENST00000460659 ECHDC2Q86YB7 292 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 MAML2Q8IZL2 1156 aaPredicted RBP11.72□□□□□ -0.53
RERE-205ENST00000460659 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
RERE-205ENST00000460659 TMEM169Q96HH4 297 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 PGBD1Q96JS3 809 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 VN1R3Q9BXE9 311 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 IL25Q9H293 177 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 SFXN1Q9H9B4 322 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 JADE2Q9NQC1 790 aa11.72□□□□□ -0.53
RERE-205ENST00000460659 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 PIK3CDO00329 1044 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 BACH1O14867 736 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 IFIT3O14879 490 aaKnown RBP11.71□□□□□ -0.53
RERE-205ENST00000460659 CLCN3P51790 818 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 CRYBB1P53674 252 aaPredicted RBP11.71□□□□□ -0.53
RERE-205ENST00000460659 MFAP1P55081 439 aaKnown RBP11.71□□□□□ -0.53
RERE-205ENST00000460659 TROAPQ12815 778 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 COL9A2Q14055 689 aaPredicted RBP11.71□□□□□ -0.53
RERE-205ENST00000460659 LETM2Q2VYF4 491 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 PLPPR4Q7Z2D5 763 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 C1orf210Q8IVY1 113 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 CCDC60Q8IWA6 550 aaPredicted RBP11.71□□□□□ -0.53
RERE-205ENST00000460659 SLC44A3Q8N4M1 653 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 CHAMP1Q96JM3 812 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 MYADMQ96S97 322 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 KCNH7Q9NS40 1196 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 WNT16Q9UBV4 365 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
RERE-205ENST00000460659 SIT1Q9Y3P8 196 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 TAF6LQ9Y6J9 622 aa11.71□□□□□ -0.53
RERE-205ENST00000460659 ASPMQ8IZT6 3477 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 HOXA2O43364 376 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 B4GALT3O60512 393 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 KINO60870 393 aaKnown RBP11.7□□□□□ -0.54
RERE-205ENST00000460659 GPR32O75388 356 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 C22orf31O95567 290 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 CCNE2O96020 404 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 CTSAP10619 480 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 ATP4AP20648 1035 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 WTAPQ15007 396 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 VARS2Q5ST30 1063 aaKnown RBP11.7□□□□□ -0.54
RERE-205ENST00000460659 ODR4Q5SWX8 454 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 METTL13Q8N6R0 699 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 LPPQ93052 612 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 RRP36Q96EU6 259 aaKnown RBP11.7□□□□□ -0.54
RERE-205ENST00000460659 SDF4Q9BRK5 362 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 ARHGEF3Q9NR81 526 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 DIAPH3Q9NSV4 1193 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 DNAJB4Q9UDY4 337 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 CDV3Q9UKY7 258 aaKnown RBP11.7□□□□□ -0.54
RERE-205ENST00000460659 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 DOCK6Q96HP0 2047 aa11.7□□□□□ -0.54
RERE-205ENST00000460659 CSDE1O75534 798 aaKnown RBP11.69□□□□□ -0.54
RERE-205ENST00000460659 KCNA4P22459 653 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 KLRC2P26717 231 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 ALDH7A1P49419 539 aaKnown RBP11.69□□□□□ -0.54
RERE-205ENST00000460659 CLCN4P51793 760 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 KIAA0319Q5VV43 1072 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
RERE-205ENST00000460659 RAB11FIP4Q86YS3 637 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 LRRC71Q8N4P6 559 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 KLHL5Q96PQ7 755 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 MXRA8Q9BRK3 442 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 PSTPIP2Q9H939 334 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 PARD6AQ9NPB6 346 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 MAN1C1Q9NR34 630 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 IGSF9Q9P2J2 1179 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 USP18Q9UMW8 372 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 INPP5FQ9Y2H2 1132 aa11.69□□□□□ -0.54
RERE-205ENST00000460659 SPDYE3A6NKU9 549 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 MEIS3P2A8K0S8 358 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 C2CD2LO14523 706 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 HBP1O60381 514 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 ADRB1P08588 477 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
RERE-205ENST00000460659 SRFP11831 508 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 HOXB3P14651 431 aaPredicted RBP11.68□□□□□ -0.54
RERE-205ENST00000460659 ZSCAN20P17040 1043 aaPredicted RBP11.68□□□□□ -0.54
RERE-205ENST00000460659 RXRAP19793 462 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 SLC11A1P49279 550 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 NT5C2P49902 561 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 NLRP11P59045 1033 aaKnown RBP11.68□□□□□ -0.54
RERE-205ENST00000460659 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 DCLRE1AQ6PJP8 1040 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 TSSK4Q6SA08 328 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 PJA1Q8NG27 643 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 TNPO1Q92973 898 aaKnown RBP11.68□□□□□ -0.54
RERE-205ENST00000460659 IGSF21Q96ID5 467 aa11.68□□□□□ -0.54
RERE-205ENST00000460659 DSCC1Q9BVC3 393 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms