RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 SEPT9Q9UHD8 586 aaPredicted RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 DMGDHQ9UI17 866 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 IPO5O00410 1097 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 CEP55Q53EZ4 464 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 RNPC3Q96LT9 517 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 SMC6Q96SB8 1091 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13□□□□□ -0.33
CPNE6-202ENST00000460657 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 NOP56O00567 594 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 KLRC4O43908 158 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 KRT14P02533 472 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 P4HBP07237 508 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 EIF2AK2P19525 551 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 LRIG3Q6UXM1 1119 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 CATSPER3Q86XQ3 398 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 KCTD17Q8N5Z5 321 aa13□□□□□ -0.33
CPNE6-202ENST00000460657 MRPL47Q9HD33 250 aaKnown RBP13□□□□□ -0.33
CPNE6-202ENST00000460657 EVI5O60447 810 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 ASNSP08243 561 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 CLTAP09496 248 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 FMO5P49326 533 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 PMS2P54278 862 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 ITIH3Q06033 890 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 BFSP1Q12934 665 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 PPP1R2P3Q6NXS1 205 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 MIGA2Q7L4E1 593 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 PNMA5Q96PV4 448 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 ABCD1P33897 745 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 PHBP35232 272 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 MDH1P40925 334 aaKnown RBP12.99□□□□□ -0.33
CPNE6-202ENST00000460657 CLNS1AP54105 237 aaKnown RBP12.99□□□□□ -0.33
CPNE6-202ENST00000460657 DHX34Q14147 1143 aaKnown RBP12.99□□□□□ -0.33
CPNE6-202ENST00000460657 PPP2R5AQ15172 486 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 SYT2Q8N9I0 419 aaPredicted RBP12.99□□□□□ -0.33
CPNE6-202ENST00000460657 ODF2LQ9ULJ1 636 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 RAD17O75943 681 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 KRT19P08727 400 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 KAZNQ674X7 775 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 MORC4Q8TE76 937 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 RSAD2Q8WXG1 361 aa12.99□□□□□ -0.33
CPNE6-202ENST00000460657 EMSYQ7Z589 1322 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 MMEP08473 750 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 RASSF2P50749 326 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 HADHQ16836 314 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 MOXD1Q6UVY6 613 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 SREK1Q8WXA9 508 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 AGPAT1Q99943 283 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 EPN3Q9H201 632 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 TBC1D22BQ9NU19 505 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ANKFY1Q9P2R3 1169 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 APEX2Q9UBZ4 518 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 CNOT8Q9UFF9 292 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 HERC5Q9UII4 1024 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 FEM1BQ9UK73 627 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 JAK3P52333 1124 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 IL9RQ01113 521 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 MTMR1Q13613 665 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 BRDTQ58F21 947 aaPredicted RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ISCUQ9H1K1 167 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 BLOC1S4Q9NUP1 217 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 STK38LQ9Y2H1 464 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 HIP1RO75146 1068 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 POLR2BP30876 1174 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 QARSP47897 775 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 LRRC31Q6UY01 552 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ARHGEF18Q6ZSZ5 1173 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ANKRD35Q8N283 1001 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 SLC35G2Q8TBE7 412 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 TSNARE1Q96NA8 513 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 NAGPAQ9UK23 515 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 EIF3DO15371 548 aaKnown RBP eCLIP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 TTI1O43156 1089 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 SORBS3O60504 671 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 EZH2Q15910 746 aaKnown RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ICE2Q659A1 982 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ZNF746Q6NUN9 644 aaPredicted RBP12.98□□□□□ -0.33
CPNE6-202ENST00000460657 CDHR1Q96JP9 859 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 TXNDC16Q9P2K2 825 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 INTUQ9ULD6 942 aa12.98□□□□□ -0.33
CPNE6-202ENST00000460657 ZNF233A6NK53 670 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ZBTB22O15209 634 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 MED24O75448 989 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 TROVE2P10155 538 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ZNF131P52739 623 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 CAPN12Q6ZSI9 719 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 TRIM59Q8IWR1 403 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ZBTB8OSQ8IWT0 167 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ZNF564Q8TBZ8 553 aaPredicted RBP12.97□□□□□ -0.33
CPNE6-202ENST00000460657 WNT8AQ9H1J5 351 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 ANAPC7Q9UJX3 599 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 SLC16A4O15374 487 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 STAM2O75886 525 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 GGPS1O95749 300 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 IL1R1P14778 569 aa12.97□□□□□ -0.33
CPNE6-202ENST00000460657 LGSNQ5TDP6 509 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms