RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 RTP1P59025 263 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 EMC2Q15006 297 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 SNX17Q15036 470 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 PCBP1Q15365 356 aaKnown RBP eCLIP12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 EFCAB12Q6NXP0 572 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 USP49Q70CQ1 688 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 RPAINQ86UA6 219 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 GPBP1Q86WP2 473 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 SCLT1Q96NL6 688 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 PLIN2Q99541 437 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
SMNDC1-203ENST00000460483 DOCK3Q8IZD9 2030 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 USO1O60763 962 aaKnown RBP12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 PQBP1O60828 265 aaKnown RBP12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 FAM13AO94988 1023 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 C22orf31O95567 290 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 PTGS1P23219 599 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 HOXC8P31273 242 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 SLC12A3P55017 1021 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 NPEPPSP55786 919 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 DMP1Q13316 513 aaPredicted RBP12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 DHX8Q14562 1220 aaKnown RBP12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 FAM102BQ5T8I3 360 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 PLA2G4FQ68DD2 849 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 SERINC5Q86VE9 423 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 ZNF410Q86VK4 478 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 FMR1NBQ8N0W7 255 aaPredicted RBP12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 USP38Q8NB14 1042 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 C2orf40Q9H1Z8 148 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 PARVGQ9HBI0 331 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 LMBRD1Q9NUN5 540 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 WRAP73Q9P2S5 460 aaPredicted RBP12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 AKT3Q9Y243 479 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 NR2E3Q9Y5X4 410 aa12.21□□□□□ -0.45
SMNDC1-203ENST00000460483 KIAA1217Q5T5P2 1943 aa12.21□□□□□ -0.46
SMNDC1-203ENST00000460483 IGKV6-21A0A0C4DH24 114 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 PVALEFA0A1B0GWK0 134 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 LETM1O95202 739 aaPredicted RBP12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 STBD1O95210 358 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 CLTBP09497 229 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 EFNA5P52803 228 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 POU5F1BQ06416 359 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 ALCAMQ13740 583 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 MCM6Q14566 821 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 HSP90AA2PQ14568 343 aaPredicted RBP12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 E2F4Q16254 413 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 ECM1Q16610 540 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 LONRF3Q496Y0 759 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 GDF6Q6KF10 455 aaPredicted RBP12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 C1orf186Q6ZWK4 172 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 ZBTB8OSQ8IWT0 167 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 CHAMP1Q96JM3 812 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 ANP32EQ9BTT0 268 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 TMEM39AQ9NV64 488 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 DACT1Q9NYF0 836 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 ATP11BQ9Y2G3 1177 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 TELO2Q9Y4R8 837 aa12.2□□□□□ -0.46
SMNDC1-203ENST00000460483 TREHO43280 583 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 GTPBP6O43824 516 aaPredicted RBP12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 EVI5O60447 810 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 MAPTP10636 758 aaKnown RBP12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 IDEP14735 1019 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 THPOP40225 353 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 PPP1R2P41236 205 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 PHKA2P46019 1235 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 ASIC1P78348 528 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 ADAM17P78536 824 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 TLE2Q04725 743 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 PSMD2Q13200 908 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 POSTNQ15063 836 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 NAALADL2Q58DX5 795 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 APBB1IPQ7Z5R6 666 aaPredicted RBP12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 DDX12PQ92771 950 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 PAGE5Q96GU1 130 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 C7orf25Q9BPX7 421 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 GCOM2Q9BZD3 368 aaPredicted RBP12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 ZHX3Q9H4I2 956 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 BLOC1S4Q9NUP1 217 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 SERTAD1Q9UHV2 236 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 SQORQ9Y6N5 450 aa12.19□□□□□ -0.46
SMNDC1-203ENST00000460483 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 ZBTB42B2RXF5 422 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 ACTN4O43707 911 aaKnown RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 B4GALT4O60513 344 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 NR1I2O75469 434 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 CD4P01730 458 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 PLS3P13797 630 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 RFC2P35250 354 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 NAMPTP43490 491 aa12.18□□□□□ -0.46
SMNDC1-203ENST00000460483 AFMP43652 599 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms