RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SPOCK3Q9BQ16 436 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 C16orf70Q9BSU1 422 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 IKZF4Q9H2S9 585 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 AZI2Q9H6S1 392 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
USP39-210ENST00000459775 SMC2O95347 1197 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 LYPLA2O95372 231 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 TCF3P15923 654 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 NLRP12P59046 1061 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 IGBP1P78318 339 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 DRP2Q13474 957 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 TSR1Q2NL82 804 aaKnown RBP11.42□□□□□ -0.58
USP39-210ENST00000459775 KLHL10Q6JEL2 608 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 UBE2Q1Q7Z7E8 422 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 LUZP1Q86V48 1076 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 ELOA2Q8IYF1 753 aaPredicted RBP11.42□□□□□ -0.58
USP39-210ENST00000459775 DAW1Q8N136 415 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 MED15Q96RN5 788 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 PANK4Q9NVE7 773 aa11.42□□□□□ -0.58
USP39-210ENST00000459775 KIAA1522Q9P206 1035 aaPredicted RBP11.42□□□□□ -0.58
USP39-210ENST00000459775 TPX2Q9ULW0 747 aaKnown RBP11.42□□□□□ -0.58
USP39-210ENST00000459775 ZBTB42B2RXF5 422 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 HIP1RO75146 1068 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 LGR5O75473 907 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 TPM2P07951 284 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 ATXN8OSP0DMR3 200 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 AKR1A1P14550 325 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 CASP5P51878 434 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 AMPD3Q01432 767 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 COASYQ13057 564 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 GSE1Q14687 1217 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 SFR1Q86XK3 245 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 TRMT44Q8IYL2 757 aaKnown RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 ZNF668Q96K58 619 aaPredicted RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 CYP26B1Q9NR63 512 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 HMGCRP04035 888 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 MYL3P08590 195 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 GRK4P32298 578 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 GYS2P54840 703 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 STX17P56962 302 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 MAPK7Q13164 816 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 STX1AQ16623 288 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 HSP90AA4PQ58FG1 418 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 XKR3Q5GH77 459 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 HERC4Q5GLZ8 1057 aaPredicted RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 FAM160B1Q5W0V3 765 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 HS6ST3Q8IZP7 471 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 KIAA0895Q8NCT3 520 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 SLAIN1Q8ND83 568 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 AFAP1L1Q8TED9 768 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 KAT2BQ92831 832 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 EMID1Q96A84 441 aaPredicted RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 TMEM143Q96AN5 459 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 EEF2KMTQ96G04 330 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 CCDC43Q96MW1 224 aaKnown RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 GSDMAQ96QA5 445 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 CEP89Q96ST8 783 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 MAGEF1Q9HAY2 307 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 XPNPEP1Q9NQW7 623 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 DBR1Q9UK59 544 aaKnown RBP11.41□□□□□ -0.58
USP39-210ENST00000459775 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
USP39-210ENST00000459775 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 PPP1R3GB7ZBB8 358 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 H3BRB1 525 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 SEPT4O43236 478 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 PRCPP42785 496 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 HIC1Q14526 733 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 MTFR1Q15390 333 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 FSCN1Q16658 493 aaKnown RBP11.4□□□□□ -0.58
USP39-210ENST00000459775 GNASQ5JWF2 1037 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 FAM102BQ5T8I3 360 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 MAP3K21Q5TCX8 1036 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 UNC13DQ70J99 1090 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 LRRC71Q8N4P6 559 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 AP5M1Q9H0R1 490 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 SMARCAD1Q9H4L7 1026 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 TUT1Q9H6E5 874 aaKnown RBP11.4□□□□□ -0.58
USP39-210ENST00000459775 CBX8Q9HC52 389 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 EXOC1Q9NV70 894 aa11.4□□□□□ -0.58
USP39-210ENST00000459775 MKI67P46013 3256 aaKnown RBP11.4□□□□□ -0.58
USP39-210ENST00000459775 SLC26A4O43511 780 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 INSRRP14616 1297 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 MUTP22033 750 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 NMT1P30419 496 aaKnown RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 PMS1P54277 932 aaKnown RBP11.39□□□□□ -0.59
USP39-210ENST00000459775 EHHADHQ08426 723 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 DGKDQ16760 1214 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 CXCL17Q6UXB2 119 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 PLPPR4Q7Z2D5 763 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 RPAINQ86UA6 219 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 BSNDQ8WZ55 320 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 CCDC34Q96HJ3 373 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 SUGCTQ9HAC7 445 aa11.39□□□□□ -0.59
USP39-210ENST00000459775 ANKEF1Q9NU02 776 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms