RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ZSCAN30Q86W11 494 aa26.89■■□□□ 1.89
U2AF1-204ENST00000459639 TRIM50Q86XT4 487 aa26.89■■□□□ 1.89
U2AF1-204ENST00000459639 SPIRE2Q8WWL2 714 aa26.89■■□□□ 1.89
U2AF1-204ENST00000459639 FLRT1Q9NZU1 646 aa26.89■■□□□ 1.89
U2AF1-204ENST00000459639 ZKSCAN5Q9Y2L8 839 aa26.89■■□□□ 1.89
U2AF1-204ENST00000459639 CETN3O15182 167 aa26.88■■□□□ 1.89
U2AF1-204ENST00000459639 SMPD1P17405 629 aa26.88■■□□□ 1.89
U2AF1-204ENST00000459639 SMTNP53814 917 aa26.88■■□□□ 1.89
U2AF1-204ENST00000459639 ZNF784Q8NCA9 323 aaPredicted RBP26.88■■□□□ 1.89
U2AF1-204ENST00000459639 SLC7A3Q8WY07 619 aa26.88■■□□□ 1.89
U2AF1-204ENST00000459639 HVCN1Q96D96 273 aa26.88■■□□□ 1.89
U2AF1-204ENST00000459639 ITIH6Q6UXX5 1313 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 TGFB1I1O43294 461 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 PRKCSHP14314 528 aaPredicted RBP26.87■■□□□ 1.89
U2AF1-204ENST00000459639 CYP2B6P20813 491 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 NR2F2P24468 414 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 RPL13P26373 211 aaKnown RBP26.87■■□□□ 1.89
U2AF1-204ENST00000459639 CTGFP29279 349 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 MARSP56192 900 aaKnown RBP26.87■■□□□ 1.89
U2AF1-204ENST00000459639 GTF2BQ00403 316 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 ADAM9Q13443 819 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 PLCB4Q15147 1175 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 HAUS6Q7Z4H7 955 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 CCDC150Q8NCX0 1101 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 GOLGA5Q8TBA6 731 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 NTPCRQ9BSD7 190 aaKnown RBP26.87■■□□□ 1.89
U2AF1-204ENST00000459639 POLR3FQ9H1D9 316 aaPredicted RBP26.87■■□□□ 1.89
U2AF1-204ENST00000459639 TMEM206Q9H813 350 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 KCNG1Q9UIX4 513 aa26.87■■□□□ 1.89
U2AF1-204ENST00000459639 IGHA2P01877 340 aa26.86■■□□□ 1.89
U2AF1-204ENST00000459639 NPTX2P47972 431 aa26.86■■□□□ 1.89
U2AF1-204ENST00000459639 ACCSQ96QU6 501 aa26.86■■□□□ 1.89
U2AF1-204ENST00000459639 NOC4LQ9BVI4 516 aaKnown RBP26.86■■□□□ 1.89
U2AF1-204ENST00000459639 GBP3Q9H0R5 595 aa26.86■■□□□ 1.89
U2AF1-204ENST00000459639 SIP14410 1827 aa26.86■■□□□ 1.89
U2AF1-204ENST00000459639 CASP8AP2Q9UKL3 1982 aa26.86■■□□□ 1.89
U2AF1-204ENST00000459639 NR3C1P04150 777 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 LACTBP83111 547 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-204ENST00000459639 TBX2Q13207 712 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-204ENST00000459639 MAN2A1Q16706 1144 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 HS2ST1Q7LGA3 356 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 EXOC8Q8IYI6 725 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 AFG1LQ8WV93 481 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 BSNDQ8WZ55 320 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 IFT74Q96LB3 600 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 KCNF1Q9H3M0 494 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 ERAP1Q9NZ08 941 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 SLC16A4O15374 487 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 LGALS2P05162 132 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 HOXD8P13378 290 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-204ENST00000459639 YY1P25490 414 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 MARK3P27448 753 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 DNM2P50570 870 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 TNFAIP2Q03169 654 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 UBXN1Q04323 297 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 CCL14Q16627 93 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 PTPN21Q16825 1174 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 CCDC40Q4G0X9 1142 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 MIIPQ5JXC2 388 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 KSR1Q8IVT5 923 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 OR6J1Q8NGC5 347 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 ZNF830Q96NB3 372 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-204ENST00000459639 KMT5AQ9NQR1 393 aa26.85■■□□□ 1.89
U2AF1-204ENST00000459639 A0A1W2PQC6 194 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 CCDC169A6NNP5 214 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 H0YCG3 227 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 MAFO75444 373 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-204ENST00000459639 ZNF865P0CJ78 1059 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-204ENST00000459639 ABCD1P33897 745 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 SOX10P56693 466 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 SYCP3Q8IZU3 236 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 TMEM161BQ8NDZ6 487 aa26.84■■□□□ 1.89
U2AF1-204ENST00000459639 CGNQ9P2M7 1197 aaKnown RBP26.84■■□□□ 1.89
U2AF1-204ENST00000459639 ESPNB1AK53 854 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 SLC16A3O15427 465 aaKnown RBP26.83■■□□□ 1.89
U2AF1-204ENST00000459639 GAS2O43903 313 aaKnown RBP26.83■■□□□ 1.89
U2AF1-204ENST00000459639 HBP1O60381 514 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 PPFIA4O75335 1185 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 XRCC5P13010 732 aaKnown RBP26.83■■□□□ 1.89
U2AF1-204ENST00000459639 PSMC4P43686 418 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 LRRC8AQ8IWT6 810 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 CACTINQ8WUQ7 758 aaKnown RBP26.83■■□□□ 1.89
U2AF1-204ENST00000459639 CFHR5Q9BXR6 569 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 AGPAT3Q9NRZ7 376 aa26.83■■□□□ 1.89
U2AF1-204ENST00000459639 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.83■■□□□ 1.89
U2AF1-204ENST00000459639 SCP2P22307 547 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 CYP2C19P33261 490 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 ARL2P36404 184 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 SNRPFP62306 86 aaKnown RBP26.82■■□□□ 1.88
U2AF1-204ENST00000459639 TBC1D8BQ0IIM8 1120 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 PPP2R5AQ15172 486 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 VWA3BQ502W6 1294 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 KCNN1Q92952 543 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 TRPC6Q9Y210 931 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 ZBTB42B2RXF5 422 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 PES1O00541 588 aaKnown RBP26.82■■□□□ 1.88
U2AF1-204ENST00000459639 ADCY6O43306 1168 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 MMP3P08254 477 aa26.82■■□□□ 1.88
U2AF1-204ENST00000459639 SFPQP23246 707 aaKnown RBP eCLIP26.82■■□□□ 1.88
U2AF1-204ENST00000459639 MYBPC2Q14324 1141 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms