RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 CYBBP04839 570 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 AKT1P31749 480 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 PKN3Q6P5Z2 889 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 CHMP1BQ7LBR1 199 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 KIF12Q96FN5 646 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 ANAPC7Q9UJX3 599 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 TRAF3IP3Q9Y228 551 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 TRAPPC8Q9Y2L5 1435 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 A8MXQ7 604 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 RAB42Q8N4Z0 105 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 RPRD2Q5VT52 1461 aaKnown RBP17.12■□□□□ 0.33
HDAC7-217ENST00000459625 ALDH1A1P00352 501 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 KCNA2P16389 499 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 SLFN12LQ6IEE8 588 aa17.12■□□□□ 0.33
HDAC7-217ENST00000459625 ATP9BO43861 1147 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 ESRRAP11474 423 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 GCLMP48507 274 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 IQANK1A0A1B0GTG1 560 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 RASGRF2O14827 1237 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 PRKCQQ04759 706 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 ZNF235Q14590 738 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 SPATA2LQ8IUW3 424 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 RNF168Q8IYW5 571 aaPredicted RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 STX18Q9P2W9 335 aaKnown RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 PNMA6FA0A0J9YX94 578 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 ZNF263O14978 683 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 TNFAIP2Q03169 654 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 MAN2A1Q16706 1144 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 PUS7LQ9H0K6 701 aaKnown RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 UBXN8O00124 270 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 MYO1DO94832 1006 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 CENPUQ71F23 418 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 MAP3K20Q9NYL2 800 aaKnown RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 PGRMC1O00264 195 aaKnown RBP17.11■□□□□ 0.33
HDAC7-217ENST00000459625 RALAP11233 206 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 USP33Q8TEY7 942 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 ACAP3Q96P50 834 aa17.11■□□□□ 0.33
HDAC7-217ENST00000459625 RAD51Q06609 339 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 SPDYAQ5MJ70 313 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 BZW1Q7L1Q6 419 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 C1orf131Q8NDD1 294 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 RNF25Q96BH1 459 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 ADAM22Q9P0K1 906 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 NOVA2Q9UNW9 492 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 LRRC53A6NM62 1247 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 CA4P22748 312 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 SRRM1Q8IYB3 904 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 CCHCR1Q8TD31 782 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 DYDC2Q96IM9 177 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 ASNSP08243 561 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 CYP2B6P20813 491 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 RFX3P48380 749 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 DR1Q01658 176 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 GRAPQ13588 217 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 PATL1Q86TB9 770 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 GRAPLQ8TC17 118 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 SAAL1Q96ER3 474 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 ING2Q9H160 280 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 CRLF3Q8IUI8 442 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 MFN1Q8IWA4 741 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 DPF3Q92784 378 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 RNF146Q9NTX7 359 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 FAM47DPA6NHR8 397 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 ZNF658Q5TYW1 1059 aaPredicted RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 RFX8Q6ZV50 586 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 EIF2AQ9BY44 585 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 SLC13A1Q9BZW2 595 aa17.1■□□□□ 0.33
HDAC7-217ENST00000459625 DHX35Q9H5Z1 703 aaKnown RBP17.1■□□□□ 0.33
HDAC7-217ENST00000459625 CTNND1O60716 968 aaKnown RBP17.09■□□□□ 0.33
HDAC7-217ENST00000459625 SPAG7O75391 227 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 MAP4P27816 1152 aaKnown RBP17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ERLEC1Q96DZ1 483 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 MUC3BQ9H195 1237 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 TMEM63CQ9P1W3 806 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 PPARGC1AQ9UBK2 798 aaKnown RBP17.09■□□□□ 0.33
HDAC7-217ENST00000459625 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 PLEKHA8P1O95397 391 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 COPS2P61201 443 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ZNF589Q86UQ0 364 aaPredicted RBP17.09■□□□□ 0.33
HDAC7-217ENST00000459625 NRBF2Q96F24 287 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 SERPINI1Q99574 410 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 ADA2Q9NZK5 511 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L15C9J2P7 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L13C9JLJ4 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L11C9JVI0 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L18D6R9N7 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L22D6RA61 530 aa17.09■□□□□ 0.33
HDAC7-217ENST00000459625 USP17L17D6RBQ6 530 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms