RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 OSBPL7Q9BZF2 842 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 PPP1R12CQ9BZL4 782 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 POLR3FQ9H1D9 316 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 DHX33Q9H6R0 707 aaKnown RBP9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 CDHR5Q9HBB8 845 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 ATP6V0A4Q9HBG4 840 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 PRDM5Q9NQX1 630 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 PDLIM7Q9NR12 457 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 SUCLA2Q9P2R7 463 aaPredicted RBP9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 STK17AQ9UEE5 414 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 AKT3Q9Y243 479 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 PCDHA2Q9Y5H9 948 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 LAMA3Q16787 3333 aa9.64□□□□□ -0.87
CLTCL1-204ENST00000458188 COL1A2P08123 1366 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 IGKV6-21A0A0C4DH24 114 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 MBLAC1A4D2B0 266 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 DCDC2CA8MYV0 355 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 TLR3O15455 904 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 MAGEB2O15479 319 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 CSDE1O75534 798 aaKnown RBP9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 DGAT1O75907 488 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 CD4P01730 458 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 IDEP14735 1019 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 SYN1P17600 705 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 CCL23P55773 120 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 PTPN11Q06124 597 aaPredicted RBP9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 PNOCQ13519 176 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 SNX17Q15036 470 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 NFKBIBQ15653 356 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 KIZQ2M2Z5 673 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 ISM2Q6H9L7 571 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 SERINC5Q86VE9 423 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 C7orf61Q8IZ16 206 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 RETREG2Q8NC44 543 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 BSNDQ8WZ55 320 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 NLRP4Q96MN2 994 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 REEP2Q9BRK0 252 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 TMEM39AQ9NV64 488 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 KBTBD4Q9NVX7 518 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 TBC1D7Q9P0N9 293 aa9.63□□□□□ -0.87
CLTCL1-204ENST00000458188 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 SMIM35A0A1B0GVV1 85 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 TRIM43BA6NCK2 446 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 CCDC169A6NNP5 214 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 KINO60870 393 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 FGFR4P22455 802 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 GLRA2P23416 452 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 ITGB8P26012 769 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 TMOD1P28289 359 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 CYP2C18P33260 490 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 ARL2P36404 184 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 DNM2P50570 870 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 PEX3P56589 373 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 NLRP11P59045 1033 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 ASIC1P78348 528 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 LAMTOR4Q0VGL1 99 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 MAPK7Q13164 816 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 PTK7Q13308 1070 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 TRIM71Q2Q1W2 868 aaKnown RBP9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 ZNF618Q5T7W0 954 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 IER5Q5VY09 327 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 ANKRD33Q7Z3H0 272 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 DAW1Q8N136 415 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 LINC01465Q8N7H1 131 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 TRIM43Q96BQ3 446 aaPredicted RBP9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 DNAJC19Q96DA6 116 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 SCLYQ96I15 445 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 GDF15Q99988 308 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 TRIM9Q9C026 710 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 CUEDC2Q9H467 287 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 USP20Q9Y2K6 914 aa9.62□□□□□ -0.87
CLTCL1-204ENST00000458188 A0A087WZ62 844 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 GPR32O75388 356 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 FAM13AO94988 1023 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 CHRNA1P02708 482 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 CLTBP09497 229 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 CKBP12277 381 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 GUCY2CP25092 1073 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 NMT1P30419 496 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 AMPD3Q01432 767 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 POSTNQ15063 836 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 C1orf53Q5VUE5 145 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 TDHQ8IZJ6 230 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 KCTD17Q8N5Z5 321 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 RNF149Q8NC42 400 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 MCPH1Q8NEM0 835 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 NLRP7Q8WX94 980 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 PSPC1Q8WXF1 523 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 SCLT1Q96NL6 688 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 TOX2Q96NM4 488 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 MAP7D2Q96T17 732 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 OSMRQ99650 979 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 C7orf25Q9BPX7 421 aa9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 FDXACB1Q9BRP7 624 aaPredicted RBP9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 PYM1Q9BRP8 204 aaKnown RBP9.61□□□□□ -0.87
CLTCL1-204ENST00000458188 FGFBP2Q9BYJ0 223 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms